SMTL ID : 1f3x.2 (1 other biounit)

S402P MUTANT OF RABBIT MUSCLE PYRUVATE KINASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-tetramer

Ligands

4 x K: POTASSIUM ION(Non-covalent)

K.1: 5 residues within 4Å: Chain A: N.74, S.76, D.112, T.113, K.269 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:S.76, A:D.112, A:T.113 K.4: 6 residues within 4Å: Chain B: N.74, S.76, D.112, T.113, S.242, K.269 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.112, B:T.113, H2O.3 K.7: 6 residues within 4Å: Chain C: N.74, S.76, D.112, T.113, S.242, K.269 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:S.76, C:D.112, C:T.113 K.10: 6 residues within 4Å: Chain D: N.74, S.76, D.112, T.113, S.242, K.269 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:S.76, D:D.112

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 4 residues within 4Å: Chain A: K.269, E.271, D.295 Ligands: PYR.3 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:E.271, A:D.295, PYR.3 MN.5: 5 residues within 4Å: Chain B: F.243, K.269, E.271, D.295 Ligands: PYR.6 5 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions, 1 Ligand-Ligand interactions Metal complexes: B:E.271, B:E.271, B:D.295, H2O.3, PYR.6 MN.8: 5 residues within 4Å: Chain C: F.243, K.269, E.271, D.295 Ligands: PYR.9 3 PLIP interactions: 2 interactions with chain C, 1 Ligand-Ligand interactions Metal complexes: C:E.271, C:D.295, PYR.9 MN.11: 4 residues within 4Å: Chain D: K.269, E.271, D.295 Ligands: PYR.12 3 PLIP interactions: 2 interactions with chain D, 1 Ligand-Ligand interactions Metal complexes: D:E.271, D:D.295, PYR.12

4 x PYR: PYRUVIC ACID(Non-covalent)

PYR.3: 10 residues within 4Å: Chain A: R.72, K.269, E.271, M.290, A.292, R.293, G.294, D.295, T.327 Ligands: MN.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.72, A:K.269, A:G.294, A:D.295, A:T.327 Salt bridges: A:K.269 PYR.6: 10 residues within 4Å: Chain B: R.72, K.269, E.271, M.290, A.292, R.293, G.294, D.295, T.327 Ligands: MN.5 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.269, B:G.294, B:D.295, B:T.327 Salt bridges: B:K.269 PYR.9: 10 residues within 4Å: Chain C: R.72, K.269, E.271, M.290, A.292, R.293, G.294, D.295, T.327 Ligands: MN.8 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:R.72, C:K.269, C:G.294, C:D.295, C:T.327, C:T.327 Salt bridges: C:K.269 PYR.12: 10 residues within 4Å: Chain D: R.72, K.269, E.271, M.290, A.292, R.293, G.294, D.295, T.327 Ligands: MN.11 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:R.72, D:K.269, D:G.294, D:D.295, D:T.327, D:T.327 Salt bridges: D:K.269

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wooll, J.O. et al., Structural and functional linkages between subunit interfaces in mammalian pyruvate kinase. J.Mol.Biol. (2001)

Release Date

2001-10-03

Peptides

PYRUVATE KINASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

PYRUVATE KINASE

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