SMTL ID : 1fbk.1

CRYSTAL STRUCTURE OF CYTOPLASMICALLY OPEN CONFORMATION OF BACTERIORHODOPSIN

Coordinates

PDB Format Compare

Method

ELECTRON CRYSTALLOGRAPHY 3.20 Å

Oligo State

homo-trimer

Ligands

3 x RET: RETINAL(Covalent)

RET.1: 13 residues within 4Å: Chain A: W.86, T.89, T.90, L.93, M.118, S.141, T.142, M.145, W.182, Y.185, P.186, W.189, K.216 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:T.89, A:T.90, A:L.93, A:M.145, A:W.182, A:W.182, A:Y.185, A:Y.185, A:Y.185, A:P.186, A:W.189, A:W.189, A:K.216 RET.2: 13 residues within 4Å: Chain B: W.86, T.89, T.90, L.93, M.118, S.141, T.142, M.145, W.182, Y.185, P.186, W.189, K.216 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:T.89, B:T.90, B:L.93, B:M.145, B:W.182, B:W.182, B:Y.185, B:Y.185, B:Y.185, B:P.186, B:W.189, B:W.189, B:K.216 RET.3: 13 residues within 4Å: Chain C: W.86, T.89, T.90, L.93, M.118, S.141, T.142, M.145, W.182, Y.185, P.186, W.189, K.216 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:T.89, C:T.90, C:L.93, C:M.145, C:W.182, C:W.182, C:Y.185, C:Y.185, C:Y.185, C:P.186, C:W.189, C:W.189, C:K.216

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Subramaniam, S. et al., Molecular mechanism of vectorial proton translocation by bacteriorhodopsin. Nature (2000)

Release Date

2000-08-09

Peptides

BACTERIORHODOPSIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Membrane

We predict this structure to be a membrane protein.
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BACTERIORHODOPSIN