SMTL ID : 1fcy.1

ISOTYPE SELECTIVITY OF THE HUMAN RETINOIC ACID NUCLEAR RECEPTOR HRAR: THE COMPLEX WITH THE RARBETA/GAMMA-SELECTIVE RETINOID CD564

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x 564: 6-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID(Non-covalent)

564.1: 19 residues within 4Å: Chain A: F.20, W.46, F.49, L.52, A.53, C.56, L.90, M.91, I.94, R.97, F.107, S.108, G.122, F.123, G.212, L.219, I.231, M.234, L.235 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:W.46, A:F.49, A:A.53, A:L.90, A:L.90, A:I.94, A:F.107, A:F.107, A:F.123, A:L.219, A:I.231, A:L.235 Hydrogen bonds: A:S.108 Water bridges: A:C.56 Salt bridges: A:R.97 pi-Stacking: A:F.49

1 x LMU: DODECYL-ALPHA-D-MALTOSIDE(Non-covalent)

LMU.2: 8 residues within 4Å: Chain A: I.58, K.59, E.62, L.82, C.86, L.230, E.233, M.234 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.230, A:E.233, A:M.234 Hydrogen bonds: A:K.59, A:K.59, A:E.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Klaholz, B.P. et al., Structural basis for isotype selectivity of the human retinoic acid nuclear receptor. J.Mol.Biol. (2000)

Release Date

2000-09-11

Peptides

RETINOIC ACID RECEPTOR GAMMA-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RETINOIC ACID RECEPTOR GAMMA-1