SMTL ID : 1fdk.1

CARBOXYLIC ESTER HYDROLASE (PLA2-MJ33 INHIBITOR COMPLEX)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.91 Å

Oligo State

homo-dimer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: Y.28, G.30, G.32, D.49 Ligands: GLE.2 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:Y.28, A:G.30, A:G.32, A:D.49, A:D.49 CA.3: 5 residues within 4Å: Chain B: Y.28, G.30, G.32, D.49 Ligands: GLE.4 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:Y.28, B:G.30, B:G.32, B:D.49, B:D.49

2 x GLE: 1-DECYL-3-TRIFLUORO ETHYL-SN-GLYCERO-2-PHOSPHOMETHANOL(Non-covalent)

GLE.2: 16 residues within 4Å: Chain A: F.5, I.9, P.18, L.19, F.22, N.23, Y.28, C.29, G.30, L.31, C.45, H.48, D.49, Y.69, F.106 Ligands: CA.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.30, A:Y.69 Salt bridges: A:H.48 GLE.4: 16 residues within 4Å: Chain B: F.5, I.9, P.18, L.19, F.22, N.23, Y.28, C.29, G.30, L.31, C.45, H.48, D.49, Y.69, F.106 Ligands: CA.3 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.30, B:Y.69, B:Y.69 Salt bridges: B:H.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sekar, K. et al., Crystal structure of the complex of bovine pancreatic phospholipase A2 with the inhibitor 1-hexadecyl-3-(trifluoroethyl)-sn-glycero-2-phosphomethanol,. Biochemistry (1997)

Release Date

1998-10-14

Peptides

PHOSPHOLIPASE A2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PHOSPHOLIPASE A2

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