SMTL ID : 1fn6.1

CRYSTAL STRUCTURE OF PORCINE BETA TRYPSIN WITH 0.1% POLYDOCANOL

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: E.52, N.54, V.57, E.59, E.62 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.52, A:N.54, A:E.59, A:E.62, H2O.2

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: F.24, H.40, Q.174, G.175, S.177 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.175, A:S.177, A:S.177 Salt bridges: A:H.40

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 9 residues within 4Å: Chain A: A.8, A.9, N.10, S.11, I.12, P.13, E.52, H.53, L.135 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.10, A:I.12, A:I.12, A:H.53 Water bridges: A:N.10 EDO.4: 1 residues within 4Å: Chain A: R.107 No protein-ligand interaction detected (PLIP)

1 x MOH: METHANOL(Non-functional Binders)

MOH.5: 1 residues within 4Å: Chain A: Q.174 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Deepthi, S. et al., Structures of porcine beta-trypsin-detergent complexes: the stabilization of proteins through hydrophilic binding of polydocanol. Acta Crystallogr.,Sect.D (2001)

Release Date

2000-09-13

Peptides

TRYPSIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRYPSIN

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