SMTL ID : 1fqt.1

CRYSTAL STRUCTURE OF THE RIESKE-TYPE FERREDOXIN ASSOCIATED WITH BIPHENYL DIOXYGENASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.1: 8 residues within 4Å: Chain A: C.46, H.48, G.49, C.66, L.68, H.69, G.71, P.85 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.46, A:H.48, A:C.66, A:H.69 FES.4: 8 residues within 4Å: Chain B: C.46, H.48, G.49, C.66, L.68, H.69, G.71, P.85 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.46, B:H.48, B:C.66, B:H.69

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: C.86, E.87, A.88 Chain B: R.8, V.9, E.24, S.25, F.105 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.8, B:E.24, A:A.88 Water bridges: B:T.7 GOL.3: 4 residues within 4Å: Chain A: E.38, L.39, I.94, I.96 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.39, A:I.94 Water bridges: A:G.37, A:L.39, A:R.95 GOL.5: 5 residues within 4Å: Chain B: E.38, L.39, F.40, I.94, I.96 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:L.39 Water bridges: B:G.37, B:I.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Colbert, C.L. et al., A cluster exposed: structure of the Rieske ferredoxin from biphenyl dioxygenase and the redox properties of Rieske Fe-S proteins. Structure Fold.Des. (2000)

Release Date

2001-01-03

Peptides

RIESKE-TYPE FERREDOXIN OF BIPHENYL DIOXYGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RIESKE-TYPE FERREDOXIN OF BIPHENYL DIOXYGENASE