SMTL ID : 1fsa.1

THE T-STATE STRUCTURE OF LYS 42 TO ALA MUTANT OF THE PIG KIDNEY FRUCTOSE 1,6-BISPHOSPHATASE EXPRESSED IN E. COLI

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

4 x F6P: 6-O-phosphono-beta-D-fructofuranose(Non-covalent)

F6P.1: 15 residues within 4Å: Chain A: D.121, G.122, N.212, Y.215, Y.244, G.246, S.247, M.248, Y.264, K.274, L.275, R.276, E.280 Chain B: R.243 Ligands: MN.2 12 PLIP interactions: 9 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:D.121, A:G.122, A:N.212, A:Y.244, A:M.248, A:Y.264, A:K.274, A:R.276 Salt bridges: A:K.274, B:R.243 Water bridges: B:R.243, B:R.243 F6P.4: 13 residues within 4Å: Chain A: R.243 Chain B: D.121, N.212, Y.215, Y.244, G.246, S.247, M.248, Y.264, K.274, L.275, E.280 Ligands: MN.5 12 PLIP interactions: 11 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:D.121, B:N.212, B:Y.244, B:M.248, B:Y.264, B:Y.264, B:K.274, B:E.280 Water bridges: B:G.122, B:G.122 Salt bridges: B:K.274, A:R.243 F6P.7: 15 residues within 4Å: Chain C: D.121, G.122, N.212, Y.215, Y.244, G.246, S.247, M.248, Y.264, K.274, L.275, R.276, E.280 Chain D: R.243 Ligands: MN.8 12 PLIP interactions: 9 interactions with chain C, 3 interactions with chain D Hydrogen bonds: C:D.121, C:G.122, C:N.212, C:Y.244, C:M.248, C:Y.264, C:K.274, C:R.276 Salt bridges: C:K.274, D:R.243 Water bridges: D:R.243, D:R.243 F6P.10: 13 residues within 4Å: Chain C: R.243 Chain D: D.121, N.212, Y.215, Y.244, G.246, S.247, M.248, Y.264, K.274, L.275, E.280 Ligands: MN.11 12 PLIP interactions: 1 interactions with chain C, 11 interactions with chain D Salt bridges: C:R.243, D:K.274 Hydrogen bonds: D:D.121, D:N.212, D:Y.244, D:M.248, D:Y.264, D:Y.264, D:K.274, D:E.280 Water bridges: D:G.122, D:G.122

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 6 residues within 4Å: Chain A: E.97, D.118, D.121, R.276, E.280 Ligands: F6P.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.118, A:D.121, A:E.280, H2O.1 MN.5: 4 residues within 4Å: Chain B: D.118, D.121, E.280 Ligands: F6P.4 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.118, B:D.121, B:E.280, H2O.3 MN.8: 6 residues within 4Å: Chain C: E.97, D.118, D.121, R.276, E.280 Ligands: F6P.7 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:D.118, C:D.121, C:E.280, H2O.6 MN.11: 4 residues within 4Å: Chain D: D.118, D.121, E.280 Ligands: F6P.10 4 PLIP interactions: 3 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:D.118, D:D.121, D:E.280, H2O.8

4 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.3: 13 residues within 4Å: Chain A: V.17, Q.20, G.21, G.26, T.27, G.28, E.29, M.30, T.31, K.112, Y.113, R.140, V.160 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:T.27, A:T.27, A:T.27, A:G.28, A:E.29, A:M.30, A:T.31, A:Y.113, A:Y.113, A:R.140 Salt bridges: A:K.112 AMP.6: 16 residues within 4Å: Chain B: V.17, Q.20, G.21, A.24, G.26, T.27, G.28, E.29, M.30, T.31, L.34, K.112, Y.113, R.140, V.160, M.177 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:T.27, B:T.27, B:G.28, B:E.29, B:M.30, B:T.31, B:Y.113, B:Y.113, B:R.140 Salt bridges: B:K.112 AMP.9: 13 residues within 4Å: Chain C: V.17, Q.20, G.21, G.26, T.27, G.28, E.29, M.30, T.31, K.112, Y.113, R.140, V.160 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:T.27, C:T.27, C:T.27, C:G.28, C:E.29, C:M.30, C:T.31, C:Y.113, C:Y.113, C:R.140 Salt bridges: C:K.112 AMP.12: 16 residues within 4Å: Chain D: V.17, Q.20, G.21, A.24, G.26, T.27, G.28, E.29, M.30, T.31, L.34, K.112, Y.113, R.140, V.160, M.177 10 PLIP interactions: 10 interactions with chain D Hydrogen bonds: D:T.27, D:T.27, D:G.28, D:E.29, D:M.30, D:T.31, D:Y.113, D:Y.113, D:R.140 Salt bridges: D:K.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, G. et al., Evidence for an active T-state pig kidney fructose 1,6-bisphosphatase: interface residue Lys-42 is important for allosteric inhibition and AMP cooperativity. Protein Sci. (1996)

Release Date

1997-09-04

Peptides

FRUCTOSE 1,6-BISPHOSPHATASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

FRUCTOSE 1,6-BISPHOSPHATASE