- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.05 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 4 x PRP: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose(Non-covalent)
PRP.3: 22 residues within 4Å:- Chain A: L.81, K.82, G.83, R.117, L.118, K.119, S.120, Y.121, E.149, D.150, I.151, V.152, D.153, T.154, G.155, F.156, T.157, D.209, R.215
- Ligands: MG.1, MG.2, 9DG.4
28 PLIP interactions:28 interactions with chain A- Hydrogen bonds: A:L.81, A:K.82, A:G.83, A:S.120, A:Y.121, A:Y.121, A:E.149, A:D.150, A:D.153, A:T.154, A:G.155, A:F.156, A:T.157, A:T.157
- Water bridges: A:S.84, A:R.117, A:R.117, A:I.151, A:T.154, A:T.154, A:L.158, A:D.209, A:R.215, A:R.215, A:R.215, A:R.215
- Salt bridges: A:R.117, A:R.215
PRP.7: 22 residues within 4Å:- Chain B: L.81, K.82, G.83, R.117, L.118, K.119, S.120, Y.121, E.149, D.150, I.151, V.152, D.153, T.154, G.155, F.156, T.157, D.209, R.215
- Ligands: MG.5, MG.6, 9DG.8
25 PLIP interactions:25 interactions with chain B- Hydrogen bonds: B:K.82, B:G.83, B:S.120, B:Y.121, B:Y.121, B:Y.121, B:E.149, B:D.150, B:D.153, B:T.154, B:G.155, B:F.156, B:T.157, B:T.157
- Water bridges: B:S.84, B:R.117, B:R.117, B:I.151, B:L.158, B:R.215, B:R.215, B:R.215, B:R.215
- Salt bridges: B:R.117, B:R.215
PRP.11: 22 residues within 4Å:- Chain C: L.81, K.82, G.83, R.117, L.118, K.119, S.120, Y.121, E.149, D.150, I.151, V.152, D.153, T.154, G.155, F.156, T.157, D.209, R.215
- Ligands: MG.9, MG.10, 9DG.12
28 PLIP interactions:28 interactions with chain C- Hydrogen bonds: C:L.81, C:K.82, C:G.83, C:S.120, C:Y.121, C:Y.121, C:E.149, C:D.150, C:D.153, C:T.154, C:G.155, C:F.156, C:T.157, C:T.157
- Water bridges: C:S.84, C:R.117, C:R.117, C:I.151, C:T.154, C:T.154, C:L.158, C:D.209, C:R.215, C:R.215, C:R.215, C:R.215
- Salt bridges: C:R.117, C:R.215
PRP.15: 22 residues within 4Å:- Chain D: L.81, K.82, G.83, R.117, L.118, K.119, S.120, Y.121, E.149, D.150, I.151, V.152, D.153, T.154, G.155, F.156, T.157, D.209, R.215
- Ligands: MG.13, MG.14, 9DG.16
25 PLIP interactions:25 interactions with chain D- Hydrogen bonds: D:K.82, D:G.83, D:S.120, D:Y.121, D:Y.121, D:Y.121, D:E.149, D:D.150, D:D.153, D:T.154, D:G.155, D:F.156, D:T.157, D:T.157
- Water bridges: D:S.84, D:R.117, D:R.117, D:I.151, D:L.158, D:R.215, D:R.215, D:R.215, D:R.215
- Salt bridges: D:R.117, D:R.215
- 4 x 9DG: 9-DEAZAGUANINE(Non-covalent)
9DG.4: 10 residues within 4Å:- Chain A: Y.121, I.151, D.153, K.181, V.201, W.202, I.203, Y.208, D.209
- Ligands: PRP.3
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:D.153, A:K.181, A:I.203, A:I.203
- Water bridges: A:D.209, A:D.209
- pi-Stacking: A:Y.121, A:W.202, A:W.202
9DG.8: 10 residues within 4Å:- Chain B: Y.121, I.151, D.153, K.181, V.201, W.202, I.203, Y.208, D.209
- Ligands: PRP.7
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:K.181, B:I.203, B:I.203
- pi-Stacking: B:Y.121, B:W.202
9DG.12: 10 residues within 4Å:- Chain C: Y.121, I.151, D.153, K.181, V.201, W.202, I.203, Y.208, D.209
- Ligands: PRP.11
9 PLIP interactions:9 interactions with chain C- Hydrogen bonds: C:D.153, C:K.181, C:I.203, C:I.203
- Water bridges: C:D.209, C:D.209
- pi-Stacking: C:Y.121, C:W.202, C:W.202
9DG.16: 10 residues within 4Å:- Chain D: Y.121, I.151, D.153, K.181, V.201, W.202, I.203, Y.208, D.209
- Ligands: PRP.15
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:K.181, D:I.203, D:I.203
- pi-Stacking: D:Y.121, D:W.202
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Heroux, A. et al., Substrate deformation in a hypoxanthine-guanine phosphoribosyltransferase ternary complex: the structural basis for catalysis. Structure Fold.Des. (2000)
- Release Date
- 2000-12-06
- Peptides
- HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
CC
AD
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.05 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 4 x PRP: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose(Non-covalent)
- 4 x 9DG: 9-DEAZAGUANINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Heroux, A. et al., Substrate deformation in a hypoxanthine-guanine phosphoribosyltransferase ternary complex: the structural basis for catalysis. Structure Fold.Des. (2000)
- Release Date
- 2000-12-06
- Peptides
- HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
CC
AD
C