SMTL ID : 1fuj.1

PR3 (MYELOBLASTIN)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-tetramer

Ligands

4 x NAG- FUC: alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-FUC.1: 9 residues within 4Å: Chain A: R.12, Q.124, C.125, L.126, N.147, I.181, C.182, D.183, G.184 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:I.181 Hydrogen bonds: A:Q.124, A:D.183, A:G.184, A:N.147 NAG-FUC.2: 9 residues within 4Å: Chain B: R.12, Q.124, C.125, L.126, N.147, I.181, C.182, D.183, G.184 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.126, B:I.181 Hydrogen bonds: B:Q.124, B:D.183, B:G.184 NAG-FUC.3: 8 residues within 4Å: Chain C: Q.124, C.125, L.126, N.147, I.181, C.182, D.183, G.184 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:I.181 Hydrogen bonds: C:Q.124, C:I.181, C:D.183, C:G.184, C:N.147 NAG-FUC.4: 8 residues within 4Å: Chain D: Q.124, C.125, L.126, N.147, I.181, C.182, D.183, G.184 6 PLIP interactions: 6 interactions with chain D Hydrophobic interactions: D:L.126, D:I.181 Hydrogen bonds: D:Q.124, D:D.183, D:D.183, D:G.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fujinaga, M. et al., The crystal structure of PR3, a neutrophil serine proteinase antigen of Wegener's granulomatosis antibodies. J.Mol.Biol. (1996)

Release Date

1996-07-11

Peptides

PR3: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

PR3