SMTL ID : 1g6u.2 (1 other biounit)

CRYSTAL STRUCTURE OF A DOMAIN SWAPPED DIMER

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

homo-hexamer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain F: K.35 Ligands: SO4.3, SO4.5 No protein-ligand interaction detected (PLIP) SO4.3: 3 residues within 4Å: Chain B: K.35 Ligands: SO4.1, SO4.5 No protein-ligand interaction detected (PLIP) SO4.5: 3 residues within 4Å: Chain D: K.35 Ligands: SO4.1, SO4.3 No protein-ligand interaction detected (PLIP)

3 x TFA: trifluoroacetic acid(Non-covalent)

TFA.2: 7 residues within 4Å: Chain A: S.1, L.2, A.3 Chain B: S.1, L.2, A.3, L.36 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:L.2, B:A.3 TFA.4: 7 residues within 4Å: Chain C: S.1, L.2, A.3 Chain D: S.1, L.2, A.3, L.36 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:L.2, D:A.3 TFA.6: 7 residues within 4Å: Chain E: S.1, L.2, A.3 Chain F: S.1, L.2, A.3, L.36 2 PLIP interactions: 1 interactions with chain F, 1 interactions with chain E Hydrogen bonds: F:A.3, E:L.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ogihara, N.L. et al., Design of three-dimensional domain-swapped dimers and fibrous oligomers. Proc.Natl.Acad.Sci.USA (2001)

Release Date

2001-02-21

Peptides

DOMAIN SWAPPED DIMER: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

DOMAIN SWAPPED DIMER

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