SMTL ID : 1g85.1

CRYSTAL STRUCTURE OF BOVINE ODORANT BINDING PROTEIN COMPLEXED WITH IS NATURAL LIGAND

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

4 x 3OL: (3R)-oct-1-en-3-ol(Non-covalent)

3OL.1: 8 residues within 4Å: Chain A: F.36, T.38, F.56, Y.83, N.87, N.103, L.115 Ligands: 3OL.2 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.36, A:F.36, A:L.115 3OL.2: 10 residues within 4Å: Chain A: I.22, F.36, T.38, F.56, Y.83, L.115, T.116, G.117, F.119 Ligands: 3OL.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.22, A:F.36, A:F.56, A:Y.83, A:L.115, A:F.119 Hydrogen bonds: A:T.38 3OL.3: 9 residues within 4Å: Chain B: F.54, F.56, N.87, F.89, N.103, T.116, G.117, F.119 Ligands: 3OL.4 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:N.87, B:F.89, B:N.103, B:F.119 3OL.4: 7 residues within 4Å: Chain B: F.54, N.87, F.89, N.103, T.116, G.117 Ligands: 3OL.3 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:N.87, B:F.89, B:F.89, B:N.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ramoni, R. et al., The insect attractant 1-octen-3-ol is the natural ligand of bovine odorant-binding protein. J.Biol.Chem. (2001)

Release Date

2002-06-26

Peptides

ODORANT-BINDING PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ODORANT-BINDING PROTEIN