- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.64 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 6 x HG: MERCURY (II) ION(Non-covalent)
- 4 x CA: CALCIUM ION(Non-covalent)
CA.3: 1 residues within 4Å:- Chain A: G.825
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:G.825, H2O.34, H2O.34, H2O.40, H2O.40
CA.4: 6 residues within 4Å:- Chain A: Q.467, R.470, S.754, D.783
- Chain C: D.129, E.130
5 PLIP interactions:1 interactions with chain C, 2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: C:D.129, A:S.754, A:D.783, H2O.34, H2O.73
CA.17: 1 residues within 4Å:- Chain C: G.825
5 PLIP interactions:1 interactions with chain C, 4 Ligand-Water interactions- Metal complexes: C:G.825, H2O.73, H2O.73, H2O.73, H2O.79
CA.18: 6 residues within 4Å:- Chain A: D.129, E.130
- Chain C: Q.467, R.470, S.754, D.783
5 PLIP interactions:2 interactions with chain C, 1 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: C:S.754, C:D.783, A:D.129, H2O.34, H2O.73
- 4 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
MGD.5: 34 residues within 4Å:- Chain A: G.170, H.195, N.196, K.385, W.389, H.423, W.455, G.456, C.457, N.458, N.459, T.462, I.513, N.514, L.515, Y.516, T.518, A.530, A.531, H.532, D.563, N.700, R.702, Q.708, T.709, Y.711, F.774, Q.781, T.785, Y.797, K.798
- Ligands: MGD.6, O.7, 4MO.8
25 PLIP interactions:25 interactions with chain A- Hydrogen bonds: A:G.170, A:W.389, A:N.458, A:N.458, A:N.459, A:T.462, A:T.462, A:I.513, A:I.513, A:N.514, A:L.515, A:N.700, A:R.702, A:R.702, A:Q.708, A:T.709, A:T.709, A:K.798
- Water bridges: A:N.175, A:N.175, A:T.709, A:Y.711, A:Y.711, A:G.775
- Salt bridges: A:D.563
MGD.6: 37 residues within 4Å:- Chain A: C.24, R.101, G.232, N.233, N.234, E.237, S.238, Q.239, V.276, D.277, P.278, R.279, T.281, I.301, P.303, G.304, D.306, E.384, K.385, G.386, I.387, G.421, G.422, H.423, W.697, N.699, G.701, R.702, N.703, N.704, V.706, W.707, Q.708, K.798
- Ligands: MGD.5, O.7, 4MO.8
25 PLIP interactions:25 interactions with chain A- Hydrogen bonds: A:R.101, A:N.233, A:N.234, A:E.237, A:S.238, A:S.238, A:S.238, A:Q.239, A:V.276, A:V.276, A:R.279, A:R.279, A:G.304, A:K.385, A:N.699, A:R.702, A:R.702, A:Q.708, A:Q.708
- Water bridges: A:D.306, A:D.306, A:N.703
- Salt bridges: A:D.306, A:R.702, A:K.798
MGD.19: 34 residues within 4Å:- Chain C: G.170, H.195, N.196, K.385, W.389, H.423, W.455, G.456, C.457, N.458, N.459, T.462, I.513, N.514, L.515, Y.516, T.518, A.530, A.531, H.532, D.563, N.700, R.702, Q.708, T.709, Y.711, F.774, Q.781, T.785, Y.797, K.798
- Ligands: MGD.20, O.21, 4MO.22
23 PLIP interactions:23 interactions with chain C- Hydrogen bonds: C:G.170, C:W.389, C:N.458, C:N.458, C:N.459, C:T.462, C:I.513, C:I.513, C:N.514, C:L.515, C:N.700, C:R.702, C:R.702, C:Q.708, C:T.709, C:K.798
- Water bridges: C:N.175, C:N.175, C:T.462, C:T.709, C:Y.711, C:Y.711
- Salt bridges: C:D.563
MGD.20: 37 residues within 4Å:- Chain C: C.24, R.101, G.232, N.233, N.234, E.237, S.238, Q.239, V.276, D.277, P.278, R.279, T.281, I.301, P.303, G.304, D.306, E.384, K.385, G.386, I.387, G.421, G.422, H.423, W.697, N.699, G.701, R.702, N.703, N.704, V.706, W.707, Q.708, K.798
- Ligands: MGD.19, O.21, 4MO.22
23 PLIP interactions:23 interactions with chain C- Hydrogen bonds: C:R.101, C:N.233, C:N.234, C:E.237, C:S.238, C:S.238, C:S.238, C:Q.239, C:V.276, C:V.276, C:R.279, C:R.279, C:G.304, C:K.385, C:N.699, C:R.702, C:R.702, C:Q.708, C:Q.708
- Water bridges: C:N.703
- Salt bridges: C:D.306, C:R.702, C:K.798
- 2 x O: OXYGEN ATOM(Non-covalent)
O.7: 6 residues within 4Å:- Chain A: N.196, E.203, K.385
- Ligands: MGD.5, MGD.6, 4MO.8
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:N.196, A:E.203, A:K.385
- Water bridges: A:R.419, A:R.419, A:H.423
O.21: 6 residues within 4Å:- Chain C: N.196, E.203, K.385
- Ligands: MGD.19, MGD.20, 4MO.22
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:N.196, C:K.385
- Water bridges: C:R.419
- 2 x 4MO: MOLYBDENUM(IV) ION(Non-covalent)
- 2 x F3S: FE3-S4 CLUSTER(Non-covalent)
F3S.9: 12 residues within 4Å:- Chain A: C.21, F.23, C.24, V.26, G.27, C.28, Y.30, S.99, R.101, G.102, T.240, N.241
3 PLIP interactions:3 interactions with chain A,- Metal complexes: A:C.21, A:C.24, A:C.28
F3S.23: 12 residues within 4Å:- Chain C: C.21, F.23, C.24, V.26, G.27, C.28, Y.30, S.99, R.101, G.102, T.240, N.241
3 PLIP interactions:3 interactions with chain C,- Metal complexes: C:C.21, C:C.24, C:C.28
- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.10: 8 residues within 4Å:- Chain A: V.92, V.93, A.218, Y.219, E.220, H.246, E.544, R.546
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:V.92, A:Y.219, A:E.220, A:R.546
EDO.11: 6 residues within 4Å:- Chain A: D.88, A.90, S.636, G.637, N.638, N.639
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.638, A:N.638, A:N.639, A:N.639
- Water bridges: A:H.31
EDO.12: 4 residues within 4Å:- Chain A: D.392, V.395, D.790, R.791
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.791, A:R.791
- Water bridges: A:N.681
EDO.24: 8 residues within 4Å:- Chain C: V.92, V.93, A.218, Y.219, E.220, H.246, E.544, R.546
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:V.92, C:Y.219, C:E.220, C:R.546
EDO.25: 6 residues within 4Å:- Chain C: D.88, A.90, S.636, G.637, N.638, N.639
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:N.638, C:N.638, C:N.639, C:N.639
- Water bridges: C:N.18, C:H.31
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.14: 10 residues within 4Å:- Chain B: C.60, H.62, M.63, G.64, C.65, C.78, C.80, H.81, F.82, T.83
4 PLIP interactions:4 interactions with chain B,- Metal complexes: B:C.60, B:H.62, B:C.78, B:H.81
FES.27: 10 residues within 4Å:- Chain D: C.60, H.62, M.63, G.64, C.65, C.78, C.80, H.81, F.82, T.83
4 PLIP interactions:4 interactions with chain D,- Metal complexes: D:C.60, D:H.62, D:C.78, D:H.81
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ellis, P.J. et al., Crystal structure of the 100 kDa arsenite oxidase from Alcaligenes faecalis in two crystal forms at 1.64 A and 2.03 A. Structure (2001)
- Release Date
- 2000-12-13
- Peptides
- ARSENITE OXIDASE: AC
ARSENITE OXIDASE: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EC
GB
FD
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.64 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 6 x HG: MERCURY (II) ION(Non-covalent)
- 4 x CA: CALCIUM ION(Non-covalent)
- 4 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
- 2 x O: OXYGEN ATOM(Non-covalent)
- 2 x 4MO: MOLYBDENUM(IV) ION(Non-covalent)
- 2 x F3S: FE3-S4 CLUSTER(Non-covalent)
- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ellis, P.J. et al., Crystal structure of the 100 kDa arsenite oxidase from Alcaligenes faecalis in two crystal forms at 1.64 A and 2.03 A. Structure (2001)
- Release Date
- 2000-12-13
- Peptides
- ARSENITE OXIDASE: AC
ARSENITE OXIDASE: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EC
GB
FD
H