SMTL ID : 1g8o.1

CRYSTALLOGRAPHIC STRUCTURE OF THE NATIVE BOVINE ALPHA-1,3-GALACTOSYLTRANSFERASE CATALYTIC DOMAIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: D.167, D.169, N.304 Ligands: U5P.2 5 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions, 1 Ligand-Water interactions Metal complexes: A:D.167, A:D.169, A:D.169, U5P.2, H2O.4

1 x U5P: URIDINE-5'-MONOPHOSPHATE(Non-covalent)

U5P.2: 17 residues within 4Å: Chain A: F.76, A.77, V.78, R.80, Y.81, W.137, I.140, S.141, R.144, D.167, V.168, D.169, K.301, E.302, Y.303, N.304 Ligands: MN.1 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.140 Hydrogen bonds: A:F.76, A:F.76, A:V.78, A:V.78, A:R.80, A:Y.81, A:R.144, A:V.168, A:D.169, A:D.169, A:E.302, A:N.304 Water bridges: A:R.144 pi-Stacking: A:Y.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gastinel, L.N. et al., Bovine alpha1,3-galactosyltransferase catalytic domain structure and its relationship with ABO histo-blood group and glycosphingolipid glycosyltransferases. EMBO J. (2001)

Release Date

2001-05-20

Peptides

N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE

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