SMTL ID : 1g9q.1

COMPLEX STRUCTURE OF THE ADPR-ASE AND ITS SUBSTRATE ADP-RIBOSE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x APR: ADENOSINE-5-DIPHOSPHORIBOSE(Non-covalent)

APR.1: 18 residues within 4Å: Chain A: F.28, F.29, R.56, A.59, V.61, R.79, A.96, G.97, M.98, E.139, S.141, A.189 Chain B: R.50, R.51, E.52, S.133, G.135, G.136 26 PLIP interactions: 10 interactions with chain B, 16 interactions with chain A Hydrogen bonds: B:R.51, B:R.51, B:E.52, B:S.133, B:S.133, B:G.135, B:G.135, B:G.136, A:R.56, A:R.56, A:Q.77, A:M.98, A:S.141, A:S.141 Water bridges: B:T.137, A:Q.77, A:R.79, A:R.79, A:R.79, A:R.79, A:A.96, A:A.189 pi-Cation interactions: B:R.51 Salt bridges: A:R.56, A:R.79, A:R.79 APR.2: 20 residues within 4Å: Chain A: R.51, E.52, I.53, S.133, G.135, G.136 Chain B: F.28, F.29, R.56, A.59, V.61, R.79, A.96, G.97, M.98, E.112, E.139, S.141, N.163, E.164 22 PLIP interactions: 15 interactions with chain B, 7 interactions with chain A Hydrogen bonds: B:R.56, B:A.96, B:M.98, B:S.141, B:N.163, A:R.51, A:E.52, A:S.133, A:G.135, A:G.135, A:G.136 Water bridges: B:R.56, B:R.79, B:R.79, B:R.79, B:R.79, B:M.98, B:E.100 Salt bridges: B:R.56, B:R.79, B:R.79 pi-Cation interactions: A:R.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gabelli, S.B. et al., The structure of ADP-ribose pyrophosphatase reveals the structural basis for the versatility of the Nudix family. Nat.Struct.Biol. (2001)

Release Date

2001-05-02

Peptides

HYPOTHETICAL 23.7 KDA PROTEIN IN ICC-TOLC INTERGENIC REGION: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HYPOTHETICAL 23.7 KDA PROTEIN IN ICC-TOLC INTERGENIC REGION

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