SMTL ID : 1ga6.1

CRYSTAL STRUCTURE ANALYSIS OF PSCP (PSEUDOMONAS SERINE-CARBOXYL PROTEINASE) COMPLEXED WITH A FRAGMENT OF TYROSTATIN (THIS ENZYME RENAMED "SEDOLISIN" IN 2003)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.00 Å

Oligo State

monomer

Ligands

1 x TYR- UNK: FRAGMENT OF TYROSTATIN(Non-functional Binders)

TYR-UNK.1: 4 residues within 4Å: Chain A: I.35, N.111, L.114, W.136 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.136, A:W.136, A:W.136 Hydrogen bonds: A:N.111 Water bridges: A:G.110, A:L.114 pi-Stacking: A:W.136

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.328, V.329, G.344, G.346, D.348 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.328, A:V.329, A:G.344, A:G.346, A:D.348, H2O.1

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 9 residues within 4Å: Chain A: L.134, G.135, S.167, G.169, D.170, E.171, R.179, T.286, S.287 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.167, A:D.170 Water bridges: A:R.179, A:R.179 Salt bridges: A:R.179 ACT.4: 3 residues within 4Å: Chain A: P.196, P.244, W.246 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:P.196 ACT.5: 6 residues within 4Å: Chain A: K.128, G.161, S.307, L.308, G.309 Ligands: GOL.8 6 PLIP interactions: 6 interactions with chain A Water bridges: A:K.128, A:K.128, A:K.128, A:Q.160, A:G.309 Salt bridges: A:K.128 ACT.6: 5 residues within 4Å: Chain A: S.324, V.326, H.327, D.357, K.360 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.357 Water bridges: A:K.360 Salt bridges: A:H.327, A:K.360

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.7: 8 residues within 4Å: Chain A: N.9, P.10, F.48, A.51, N.52, L.273, Y.275, L.280 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.9, A:N.52, A:N.52, A:Y.275 Water bridges: A:L.273 GOL.8: 5 residues within 4Å: Chain A: G.309, F.310, S.314, F.370 Ligands: ACT.5 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.309, A:S.314, A:S.314 Water bridges: A:F.310 GOL.9: 6 residues within 4Å: Chain A: N.125, V.126, A.127, K.128, Q.162, N.306 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.125 Water bridges: A:T.29, A:N.125, A:V.126, A:K.128, A:K.128, A:N.306, A:N.306 GOL.10: 6 residues within 4Å: Chain A: A.5, T.205, N.221, E.222, G.269, T.270 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.222, A:E.222 Water bridges: A:N.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wlodawer, A. et al., Carboxyl proteinase from Pseudomonas defines a novel family of subtilisin-like enzymes. Nat.Struct.Biol. (2001)

Release Date

2000-12-13

Peptides

SERINE-CARBOXYL PROTEINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SERINE-CARBOXYL PROTEINASE

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