SMTL ID : 1gcv.1

DEOXY FORM HEMOGLOBIN FROM MUSTELUS GRISEUS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 14 residues within 4Å: Chain A: Y.42, F.43, H.58, K.61, V.62, A.65, L.83, H.87, L.91, V.93, N.97, F.98, L.101, L.135 20 PLIP interactions: 20 interactions with chain A, Hydrophobic interactions: A:Y.42, A:F.43, A:F.43, A:K.61, A:V.62, A:A.65, A:L.83, A:L.91, A:L.91, A:V.93, A:V.93, A:N.97, A:F.98, A:L.101, A:L.101, A:L.135 Salt bridges: A:K.61, A:K.61 pi-Stacking: A:H.58 Metal complexes: A:H.87 HEM.2: 17 residues within 4Å: Chain B: T.38, Y.41, F.42, R.45, H.53, I.56, V.57, A.60, L.78, K.81, H.82, L.86, V.88, S.92, F.93, L.96, I.131 20 PLIP interactions: 20 interactions with chain B, Hydrophobic interactions: B:Y.41, B:Y.41, B:F.42, B:F.42, B:I.56, B:V.57, B:L.78, B:L.78, B:L.86, B:L.86, B:V.88, B:V.88, B:F.93, B:L.96, B:L.96, B:I.131 Salt bridges: B:R.45, B:K.81 pi-Stacking: B:H.53 Metal complexes: B:H.82 HEM.3: 16 residues within 4Å: Chain C: S.39, Y.42, F.43, H.58, K.61, V.62, A.65, L.83, T.86, H.87, L.91, V.93, N.97, F.98, L.101, L.135 18 PLIP interactions: 18 interactions with chain C, Hydrophobic interactions: C:Y.42, C:F.43, C:F.43, C:V.62, C:V.62, C:L.83, C:L.83, C:L.91, C:V.93, C:V.93, C:N.97, C:F.98, C:L.101, C:L.135 Salt bridges: C:K.61, C:K.90 pi-Stacking: C:H.58 Metal complexes: C:H.87 HEM.4: 18 residues within 4Å: Chain D: M.31, T.38, Y.41, F.42, R.45, H.53, I.56, A.60, L.78, K.81, H.82, L.86, V.88, S.92, F.93, L.96, V.127, I.131 18 PLIP interactions: 18 interactions with chain D, Hydrophobic interactions: D:Y.41, D:Y.41, D:F.42, D:F.42, D:I.56, D:L.78, D:L.78, D:L.86, D:V.88, D:V.88, D:F.93, D:L.96, D:V.127, D:I.131 Salt bridges: D:R.45, D:K.81 pi-Stacking: D:H.53 Metal complexes: D:H.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Naoi, Y. et al., The functional similarity and structural diversity of human and cartilaginous fish hemoglobins. J.Mol.Biol. (2001)

Release Date

2000-08-31

Peptides

HEMOGLOBIN: AC
HEMOGLOBIN: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

HEMOGLOBIN

HEMOGLOBIN

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