SMTL ID : 1ge7.1

ZINC PEPTIDASE FROM GRIFOLA FRONDOSA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x MAN: alpha-D-mannopyranose(Post Translational Modification)

MAN.1: 4 residues within 4Å: Chain A: T.38, P.39, T.42, T.43 No protein-ligand interaction detected (PLIP) MAN.3: 3 residues within 4Å: Chain B: P.39, T.42, T.43 1 PLIP interactions: 1 interactions with chain B Water bridges: B:T.43

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: H.117, H.121, D.130 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.117, A:H.121, A:D.130, H2O.2, H2O.6 ZN.4: 3 residues within 4Å: Chain B: H.117, H.121, D.130 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.117, B:H.121, B:D.130, B:D.130, H2O.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hori, T. et al., Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms. Acta Crystallogr.,Sect.D (2001)

Release Date

2001-03-14

Peptides

PEPTIDYL-LYS METALLOENDOPEPTIDASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PEPTIDYL-LYS METALLOENDOPEPTIDASE

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