- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PGA: SUGAR (2-PHOSPHOGLYCOLIC ACID)(Non-covalent)
- 4 x MN: MANGANESE (II) ION(Non-covalent)
MN.5: 6 residues within 4Å:- Chain A: C.61, K.97, H.268, E.302, D.326
- Ligands: PGA.1
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:C.61, A:H.268, A:E.302, A:D.326
MN.6: 6 residues within 4Å:- Chain B: C.61, K.97, H.268, E.302, D.326
- Ligands: PGA.2
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:C.61, B:H.268, B:E.302, B:D.326, H2O.147
MN.7: 6 residues within 4Å:- Chain C: C.61, K.97, H.268, E.302, D.326
- Ligands: PGA.3
5 PLIP interactions:4 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:C.61, C:H.268, C:E.302, C:D.326, H2O.446
MN.8: 6 residues within 4Å:- Chain D: C.61, K.97, H.268, E.302, D.326
- Ligands: PGA.4
5 PLIP interactions:4 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:C.61, D:H.268, D:E.302, D:D.326, H2O.560
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.9: 2 residues within 4Å:- Chain A: R.99, T.100
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.100, A:T.100
- Water bridges: A:D.326
- Salt bridges: A:R.99
SO4.10: 2 residues within 4Å:- Chain B: R.99, T.100
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:T.100
- Water bridges: B:R.99, B:T.101
- Salt bridges: B:R.99
SO4.11: 2 residues within 4Å:- Chain C: R.99, T.100
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:T.100
- Water bridges: C:D.326
- Salt bridges: C:R.99
SO4.12: 2 residues within 4Å:- Chain D: R.99, T.100
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:T.100
- Water bridges: D:T.100, D:V.102, D:K.273, D:D.326, D:D.326
- Salt bridges: D:R.99
SO4.13: 4 residues within 4Å:- Chain A: G.191, T.192, I.193, K.194
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:I.193, A:K.194
SO4.14: 4 residues within 4Å:- Chain B: G.191, T.192, I.193, K.194
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:I.193, B:K.194
SO4.15: 4 residues within 4Å:- Chain C: G.191, T.192, I.193, K.194
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:I.193, C:K.194
SO4.16: 4 residues within 4Å:- Chain D: G.191, T.192, I.193, K.194
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:I.193, D:K.194
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wagner, T. et al., Structure of 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli: comparison of the Mn(2+)*2-phosphoglycolate and the Pb(2+)*2-phosphoenolpyruvate complexes and implications for catalysis. J.Mol.Biol. (2000)
- Release Date
- 2000-10-04
- Peptides
- 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PGA: SUGAR (2-PHOSPHOGLYCOLIC ACID)(Non-covalent)
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wagner, T. et al., Structure of 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli: comparison of the Mn(2+)*2-phosphoglycolate and the Pb(2+)*2-phosphoenolpyruvate complexes and implications for catalysis. J.Mol.Biol. (2000)
- Release Date
- 2000-10-04
- Peptides
- 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D