SMTL ID : 1gjb.1

ENGINEERING INHIBITORS HIGHLY SELECTIVE FOR THE S1 SITES OF SER190 TRYPSIN-LIKE SERINE PROTEASE DRUG TARGETS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 6 residues within 4Å: Chain B: Y.60, R.63, N.69, E.73, K.75 Ligands: CIT.2 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:Y.60, B:N.69, B:E.73, B:K.75 Salt bridges: B:K.75, B:K.75 CIT.2: 4 residues within 4Å: Chain B: R.21, K.75, K.106 Ligands: CIT.1 4 PLIP interactions: 4 interactions with chain B Water bridges: B:R.21 Salt bridges: B:R.21, B:K.75, B:K.75

1 x 130: 2-(2-HYDROXY-BIPHENYL)-1H-BENZOIMIDAZOLE-5-CARBOXAMIDINE(Non-covalent)

130.3: 20 residues within 4Å: Chain B: V.30, C.31, H.46, C.47, D.50, D.192, S.193, C.194, Q.195, G.196, D.197, S.198, V.216, W.218, G.219, G.221, C.222, A.223, G.229, V.230 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:Q.195, B:V.216 Hydrogen bonds: B:H.46, B:D.192, B:D.192, B:S.198, B:S.198, B:S.198 Water bridges: B:S.198, B:W.218, B:R.220 pi-Stacking: B:H.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Katz, B.A. et al., Engineering inhibitors highly selective for the S1 sites of Ser190 trypsin-like serine protease drug targets. Chem.Biol. (2001)

Release Date

2002-04-27

Peptides

UROKINASE-TYPE PLASMINOGEN ACTIVATOR: A
UROKINASE-TYPE PLASMINOGEN ACTIVATOR: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

UROKINASE-TYPE PLASMINOGEN ACTIVATOR

UROKINASE-TYPE PLASMINOGEN ACTIVATOR

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