SMTL ID : 1gmp.1

COMPLEX OF RIBONUCLEASE FROM STREPTOMYCES AUREOFACIENS WITH 2'-GMP AT 1.7 ANGSTROMS RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: A.62, R.63, T.64 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.63, A:T.64 Salt bridges: A:R.63

2 x 2GP: GUANOSINE-2'-MONOPHOSPHATE(Non-covalent)

2GP.2: 11 residues within 4Å: Chain A: V.36, F.37, Q.38, N.39, R.40, E.41, E.54, R.65, R.69, H.85, Y.86 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:Q.38, A:N.39, A:R.40, A:R.40, A:R.40, A:E.54 Water bridges: A:R.40, A:R.69, A:R.69, A:H.85 Salt bridges: A:E.41, A:R.65, A:R.69, A:H.85 pi-Cation interactions: A:R.40, A:R.40 2GP.3: 11 residues within 4Å: Chain B: V.36, F.37, Q.38, N.39, R.40, E.41, E.54, R.65, R.69, H.85, Y.86 18 PLIP interactions: 18 interactions with chain B Hydrogen bonds: B:Q.38, B:N.39, B:R.40, B:R.40, B:R.40 Water bridges: B:E.54, B:E.54, B:R.65, B:R.69, B:R.69, B:R.69, B:H.85, B:H.85 Salt bridges: B:E.41, B:R.65, B:R.69, B:H.85 pi-Cation interactions: B:R.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sevcik, J. et al., Complex of ribonuclease from Streptomyces aureofaciens with 2'-GMP at 1.7 A resolution. Acta Crystallogr.,Sect.D (1993)

Release Date

1993-10-31

Peptides

RIBONUCLEASE SA: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RIBONUCLEASE SA

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