SMTL ID : 1gnn.1

HIV-1 PROTEASE MUTANT WITH VAL 82 REPLACED BY ASN (V82N) COMPLEXED WITH U89360E (INHIBITOR)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x U0E: N-[[1-[N-ACETAMIDYL]-[1-CYCLOHEXYLMETHYL-2-HYDROXY-4-ISOPROPYL]-BUT-4-YL]-CARBONYL]-GLUTAMINYL-ARGINYL-AMIDE(Non-covalent)

U0E.1: 22 residues within 4Å: Chain A: R.8, D.25, G.27, A.28, G.48, G.49, I.50, N.82, I.84 Chain B: L.23, D.25, G.27, A.28, D.29, D.30, I.47, G.48, G.49, I.50, P.81, N.82 Ligands: U0E.2 22 PLIP interactions: 15 interactions with chain B, 7 interactions with chain A Hydrophobic interactions: B:L.23, B:A.28, B:I.47, B:I.50, B:P.81, B:N.82, A:I.50, A:I.84 Hydrogen bonds: B:G.27, B:D.29, B:D.29, B:D.30, B:D.30, B:D.30, B:G.48, B:G.48, B:I.50, A:R.8, A:R.8, A:I.50, A:N.82 Water bridges: A:R.8 U0E.2: 20 residues within 4Å: Chain A: L.23, D.25, G.27, A.28, D.29, D.30, I.47, G.48, G.49, I.50, P.81, N.82, I.84 Chain B: D.25, G.27, G.48, G.49, I.50, P.81 Ligands: U0E.1 18 PLIP interactions: 15 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:I.50, A:P.81, A:N.82, A:I.84, B:I.50 Hydrogen bonds: A:D.29, A:D.29, A:D.29, A:D.30, A:D.30, A:G.48, A:G.48, A:I.50, B:G.27 Water bridges: A:G.49, B:R.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hong, L. et al., Crystal structures of complexes of a peptidic inhibitor with wild-type and two mutant HIV-1 proteases. Biochemistry (1996)

Release Date

1996-11-08

Peptides

HIV-1 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 PROTEASE