SMTL ID : 1gq6.1

PROCLAVAMINATE AMIDINO HYDROLASE FROM STREPTOMYCES CLAVULIGERUS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-hexamer

Ligands

12 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: H.121, D.144, D.148, D.235 Ligands: MN.2 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.121, A:D.144, A:D.148, A:D.235, H2O.8, H2O.8 MN.2: 5 residues within 4Å: Chain A: D.144, H.146, D.235, D.237 Ligands: MN.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.144, A:H.146, A:D.235, A:D.237, H2O.8 MN.3: 5 residues within 4Å: Chain B: H.121, D.144, D.148, D.235 Ligands: MN.4 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.121, B:D.144, B:D.148, B:D.235, H2O.14, H2O.14 MN.4: 5 residues within 4Å: Chain B: D.144, H.146, D.235, D.237 Ligands: MN.3 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.144, B:H.146, B:D.235, B:D.237, H2O.14 MN.5: 5 residues within 4Å: Chain C: H.121, D.144, D.148, D.235 Ligands: MN.6 6 PLIP interactions: 4 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:H.121, C:D.144, C:D.148, C:D.235, H2O.22, H2O.22 MN.6: 5 residues within 4Å: Chain C: D.144, H.146, D.235, D.237 Ligands: MN.5 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:D.144, C:H.146, C:D.235, C:D.237, H2O.22 MN.7: 5 residues within 4Å: Chain D: H.121, D.144, D.148, D.235 Ligands: MN.8 6 PLIP interactions: 4 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:H.121, D:D.144, D:D.148, D:D.235, H2O.30, H2O.30 MN.8: 5 residues within 4Å: Chain D: D.144, H.146, D.235, D.237 Ligands: MN.7 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:D.144, D:H.146, D:D.235, D:D.237, H2O.30 MN.9: 5 residues within 4Å: Chain E: H.121, D.144, D.148, D.235 Ligands: MN.10 6 PLIP interactions: 4 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:H.121, E:D.144, E:D.148, E:D.235, H2O.36, H2O.36 MN.10: 5 residues within 4Å: Chain E: D.144, H.146, D.235, D.237 Ligands: MN.9 5 PLIP interactions: 4 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:D.144, E:H.146, E:D.235, E:D.237, H2O.36 MN.11: 5 residues within 4Å: Chain F: H.121, D.144, D.148, D.235 Ligands: MN.12 6 PLIP interactions: 4 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:H.121, F:D.144, F:D.148, F:D.235, H2O.44, H2O.44 MN.12: 5 residues within 4Å: Chain F: D.144, H.146, D.235, D.237 Ligands: MN.11 5 PLIP interactions: 4 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:D.144, F:H.146, F:D.235, F:D.237, H2O.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Elkins, J.M. et al., Oligomeric Structure of Proclavaminic Acid Amidino Hydrolase: Evolution of a Hydrolytic Enzyme in Clavulanic Acid Biosynthesis. Biochem.J. (2002)

Release Date

2002-06-06

Peptides

PROCLAVAMINATE AMIDINO HYDROLASE: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

PROCLAVAMINATE AMIDINO HYDROLASE

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