SMTL ID : 1gqo.1 (1 other biounit)

TYPE II DEHYDROQUINASE FROM BACILLUS SUBTILIS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-12-mer

Ligands

36 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: F.22, G.75, A.76, H.79, L.103, R.106, R.110 Chain B: D.86 Ligands: GOL.3 Ligand excluded by PLIP GOL.2: 4 residues within 4Å: Chain A: Q.112, S.113 Chain D: Y.104, H.111 Ligand excluded by PLIP GOL.3: 8 residues within 4Å: Chain A: N.10, V.11, R.13, L.14, G.15, R.17, F.22 Ligands: GOL.1 Ligand excluded by PLIP GOL.4: 10 residues within 4Å: Chain B: F.22, N.73, G.75, A.76, H.79, H.99, L.103, R.106, R.110 Chain C: D.86 Ligand excluded by PLIP GOL.5: 6 residues within 4Å: Chain B: Q.112, S.113, V.114, P.117 Chain G: Y.104, H.111 Ligand excluded by PLIP GOL.6: 5 residues within 4Å: Chain B: N.10, R.13, L.14, R.17, F.22 Ligand excluded by PLIP GOL.7: 10 residues within 4Å: Chain A: D.86 Chain C: F.22, G.75, A.76, H.79, H.99, L.103, R.106, R.110 Ligands: GOL.9 Ligand excluded by PLIP GOL.8: 6 residues within 4Å: Chain C: Q.112, S.113, V.114, P.117 Chain J: Y.104, H.111 Ligand excluded by PLIP GOL.9: 7 residues within 4Å: Chain C: N.10, V.11, R.13, L.14, R.17, F.22 Ligands: GOL.7 Ligand excluded by PLIP GOL.10: 11 residues within 4Å: Chain D: F.22, N.73, G.75, A.76, H.79, H.99, L.103, R.106, R.110 Chain E: D.86 Ligands: GOL.12 Ligand excluded by PLIP GOL.11: 6 residues within 4Å: Chain A: Y.104, H.111 Chain D: Q.112, S.113, V.114, P.117 Ligand excluded by PLIP GOL.12: 6 residues within 4Å: Chain D: N.10, R.13, L.14, R.17, F.22 Ligands: GOL.10 Ligand excluded by PLIP GOL.13: 10 residues within 4Å: Chain E: F.22, G.75, A.76, H.79, H.99, L.103, R.106, R.110 Chain F: D.86 Ligands: GOL.15 Ligand excluded by PLIP GOL.14: 6 residues within 4Å: Chain E: Q.112, S.113, V.114, P.117 Chain L: Y.104, H.111 Ligand excluded by PLIP GOL.15: 6 residues within 4Å: Chain E: N.10, R.13, L.14, R.17, F.22 Ligands: GOL.13 Ligand excluded by PLIP GOL.16: 9 residues within 4Å: Chain F: F.22, G.75, A.76, H.79, H.99, L.103, R.106, R.110 Ligands: GOL.18 Ligand excluded by PLIP GOL.17: 6 residues within 4Å: Chain F: Q.112, S.113, V.114, P.117 Chain H: Y.104, H.111 Ligand excluded by PLIP GOL.18: 6 residues within 4Å: Chain F: N.10, R.13, L.14, R.17, F.22 Ligands: GOL.16 Ligand excluded by PLIP GOL.19: 10 residues within 4Å: Chain G: F.22, G.75, A.76, H.79, H.99, L.103, R.106, R.110 Chain H: D.86 Ligands: GOL.21 Ligand excluded by PLIP GOL.20: 5 residues within 4Å: Chain B: Y.104, H.111 Chain G: S.113, V.114, P.117 Ligand excluded by PLIP GOL.21: 6 residues within 4Å: Chain G: N.10, R.13, L.14, R.17, F.22 Ligands: GOL.19 Ligand excluded by PLIP GOL.22: 11 residues within 4Å: Chain H: F.22, N.73, G.75, A.76, H.79, H.99, L.103, R.106, R.110 Chain I: D.86 Ligands: GOL.24 Ligand excluded by PLIP GOL.23: 6 residues within 4Å: Chain F: Y.104, H.111 Chain H: Q.112, S.113, V.114, P.117 Ligand excluded by PLIP GOL.24: 7 residues within 4Å: Chain H: N.10, V.11, R.13, L.14, R.17, F.22 Ligands: GOL.22 Ligand excluded by PLIP GOL.25: 9 residues within 4Å: Chain G: D.86 Chain I: G.75, A.76, H.79, H.99, L.103, R.106, R.110 Ligands: GOL.27 Ligand excluded by PLIP GOL.26: 5 residues within 4Å: Chain I: Q.112, S.113, P.117 Chain K: Y.104, H.111 Ligand excluded by PLIP GOL.27: 8 residues within 4Å: Chain I: N.10, V.11, R.13, L.14, S.16, R.17, F.22 Ligands: GOL.25 Ligand excluded by PLIP GOL.28: 10 residues within 4Å: Chain J: F.22, G.75, A.76, H.79, H.99, L.103, R.106, R.110 Chain K: D.86 Ligands: GOL.30 Ligand excluded by PLIP GOL.29: 6 residues within 4Å: Chain C: Y.104, H.111 Chain J: Q.112, S.113, V.114, P.117 Ligand excluded by PLIP GOL.30: 5 residues within 4Å: Chain J: N.10, R.13, L.14, F.22 Ligands: GOL.28 Ligand excluded by PLIP GOL.31: 9 residues within 4Å: Chain K: N.73, G.75, H.79, H.99, L.103, R.106, R.110 Chain L: D.86 Ligands: GOL.33 Ligand excluded by PLIP GOL.32: 6 residues within 4Å: Chain I: Y.104, H.111 Chain K: Q.112, S.113, V.114, P.117 Ligand excluded by PLIP GOL.33: 6 residues within 4Å: Chain K: N.10, V.11, R.13, L.14, R.17 Ligands: GOL.31 Ligand excluded by PLIP GOL.34: 10 residues within 4Å: Chain J: D.86 Chain L: G.75, A.76, H.79, H.99, S.101, L.103, R.106, R.110 Ligands: GOL.36 Ligand excluded by PLIP GOL.35: 6 residues within 4Å: Chain E: Y.104, H.111 Chain L: Q.112, S.113, V.114, P.117 Ligand excluded by PLIP GOL.36: 4 residues within 4Å: Chain L: N.10, R.13, L.14 Ligands: GOL.34 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Robinson, D.A. et al., Crystal Structure of the Type II Dehydroquinase from Bacillus Subtilis. To be Published

Release Date

2002-12-12

Peptides

DEHYDROQUINASE: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

DEHYDROQUINASE

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