SMTL ID : 1gt3.1

Complex of Bovine Odorant Binding Protein with dihydromyrcenol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x DHM: 2,6-DIMETHYL-7-OCTEN-2-OL(Non-covalent)

DHM.1: 8 residues within 4Å: Chain A: I.22, F.36, F.54, V.69, Y.83, N.87, N.103 Ligands: 3OM.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.22, A:F.36, A:F.36, A:F.54, A:V.69, A:Y.83, A:N.103 DHM.4: 9 residues within 4Å: Chain B: I.22, F.36, T.38, V.69, A.81, N.87, N.103, F.119 Ligands: 3OM.3 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:I.22, B:F.36, B:V.69, B:N.87, B:F.119

2 x 3OM: (3S)-1-octen-3-ol(Non-covalent)

3OM.2: 7 residues within 4Å: Chain A: F.36, T.38, F.40, F.56, V.69, E.117 Ligands: DHM.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.36, A:F.56, A:V.69 Hydrogen bonds: A:T.38 3OM.3: 9 residues within 4Å: Chain B: F.40, F.54, A.81, N.87, N.103, T.116, E.117, F.119 Ligands: DHM.4 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:A.81, B:N.87, B:N.103, B:F.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vincent, F. et al., Crystal Structures of Bovine Odorant-Binding Protein in Complex with Odorant Molecules. Eur.J.Biochem. (2004)

Release Date

2003-10-03

Peptides

ODORANT-BINDING PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ODORANT-BINDING PROTEIN

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