SMTL ID : 1gui.1

CBM4 structure and function

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x BGC- BGC- BGC- BGC- BGC- BGC: beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose

BGC-BGC-BGC-BGC-BGC-BGC.1: 12 residues within 4Å: Chain A: Q.15, W.25, Y.30, W.59, Q.62, N.64, K.92, L.94, W.100, N.102, Q.132, E.136 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.30, A:Y.30

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 3 residues within 4Å: Chain A: T.6, G.45, D.148 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.6, A:G.45, A:D.148, H2O.1, H2O.4, H2O.4

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: N.3, N.4, G.5, T.6 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.3, A:N.4, A:G.5, A:T.6, A:T.6 GOL.4: 5 residues within 4Å: Chain A: Y.46, K.82, W.114, Y.146 Ligands: GOL.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.82, A:K.82 GOL.5: 4 residues within 4Å: Chain A: K.80, W.114, D.148 Ligands: GOL.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.80, A:K.80 GOL.6: 6 residues within 4Å: Chain A: N.90, V.91, K.92, A.105, Q.106, T.107 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.90 Water bridges: A:N.90, A:N.90 GOL.7: 5 residues within 4Å: Chain A: N.102, Y.103, F.104, A.105, Q.106 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.102, A:A.105, A:A.105, A:Q.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boraston, A.B. et al., Differential Oligosaccharide Recognition by Evolutionarily-Related Beta-1,4 and Beta-1,3 Glucan-Binding Modules. J.Mol.Biol. (2002)

Release Date

2002-09-26

Peptides

LAMINARINASE 16A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LAMINARINASE 16A