SMTL ID : 1gzu.1

Crystal Structure of Human Nicotinamide Mononucleotide Adenylyltransferase in Complex with NMN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-hexamer

Ligands

6 x NMN: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE(Non-covalent)

NMN.1: 13 residues within 4Å: Chain A: G.26, S.27, V.62, Y.66, K.68, W.103, E.105, T.106, L.107, L.170, L.179, W.180, D.184 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.27, A:Y.66, A:T.106, A:T.106, A:L.107, A:D.184 Salt bridges: A:K.68 pi-Stacking: A:W.103, A:W.180 NMN.2: 12 residues within 4Å: Chain B: C.25, G.26, S.27, V.62, Y.66, K.68, W.103, E.105, T.106, L.170, L.179, W.180 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:W.103, B:L.179, B:W.180 Hydrogen bonds: B:S.27, B:Y.66, B:T.106, B:T.106, B:L.179 Salt bridges: B:K.68 NMN.3: 11 residues within 4Å: Chain C: C.25, G.26, S.27, V.62, Y.66, K.68, W.103, T.106, L.170, L.179, W.180 9 PLIP interactions: 9 interactions with chain C Hydrophobic interactions: C:L.179, C:L.179 Hydrogen bonds: C:S.27, C:Y.66, C:T.106, C:L.179 Salt bridges: C:K.68 pi-Stacking: C:W.103, C:W.180 NMN.4: 13 residues within 4Å: Chain D: G.26, S.27, V.62, Y.66, K.68, W.103, E.105, T.106, L.107, L.170, L.179, W.180, D.184 9 PLIP interactions: 9 interactions with chain D Hydrogen bonds: D:S.27, D:T.106, D:T.106, D:L.107, D:D.184, D:D.184 Salt bridges: D:K.68 pi-Stacking: D:W.103, D:W.180 NMN.5: 12 residues within 4Å: Chain E: C.25, G.26, S.27, V.62, Y.66, K.68, W.103, E.105, T.106, L.170, L.179, W.180 8 PLIP interactions: 8 interactions with chain E Hydrophobic interactions: E:W.103, E:L.179, E:W.180 Hydrogen bonds: E:S.27, E:T.106, E:T.106, E:L.179 Salt bridges: E:K.68 NMN.6: 11 residues within 4Å: Chain F: C.25, G.26, S.27, V.62, Y.66, K.68, W.103, T.106, L.170, L.179, W.180 9 PLIP interactions: 9 interactions with chain F Hydrophobic interactions: F:L.179, F:L.179 Hydrogen bonds: F:S.27, F:T.106, F:T.106, F:L.179 Salt bridges: F:K.68 pi-Stacking: F:W.103, F:W.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Werner, E. et al., Crystal structure of human nicotinamide mononucleotide adenylyltransferase in complex with NMN. FEBS Lett. (2002)

Release Date

2002-07-05

Peptides

NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE