- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.85 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 2 x PSD: 5'-O-[N-(PROLYL)-SULFAMOYL]ADENOSINE(Non-covalent)
PSD.2: 23 residues within 4Å:- Chain A: T.111, E.113, R.142, E.144, F.150, L.151, R.152, T.153, F.156, W.158, E.160, H.162, F.205, Q.225, A.226, G.227, T.228, H.230, S.258, W.259, G.260, S.262, R.264
17 PLIP interactions:17 interactions with chain A- Hydrogen bonds: A:T.111, A:E.113, A:R.142, A:R.142, A:E.144, A:T.153, A:Q.225, A:T.228, A:H.230, A:H.230, A:S.258, A:G.260, A:S.262, A:S.262, A:R.264
- pi-Stacking: A:F.156, A:F.156
PSD.6: 23 residues within 4Å:- Chain B: T.111, E.113, R.142, E.144, F.150, L.151, R.152, T.153, F.156, W.158, E.160, H.162, F.205, Q.225, A.226, G.227, T.228, H.230, S.258, W.259, G.260, S.262, R.264
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:E.160
- Hydrogen bonds: B:T.111, B:E.113, B:R.142, B:R.142, B:E.144, B:T.153, B:Q.225, B:T.228, B:H.230, B:S.258, B:G.260, B:S.262, B:S.262, B:R.264
- pi-Stacking: B:F.156, B:F.156
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 6 residues within 4Å:- Chain A: R.152, K.199, Q.225, R.264, R.445, Y.477
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:R.152, A:Q.225, A:Q.225
- Salt bridges: A:K.199, A:R.264, A:R.445
SO4.4: 4 residues within 4Å:- Chain A: R.312, V.322, H.323, L.324
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:L.324
- Salt bridges: A:R.312, A:H.323
SO4.7: 6 residues within 4Å:- Chain B: R.152, K.199, Q.225, R.264, R.445, Y.477
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:R.152, B:Q.225, B:Q.225
- Salt bridges: B:K.199, B:R.264, B:R.445
SO4.8: 4 residues within 4Å:- Chain B: R.312, V.322, H.323, L.324
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:L.324, B:L.324
- Salt bridges: B:R.312, B:H.323
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Yaremchuk, A. et al., A Succession of Substrate Induced Conformational Changes Ensures the Amino Acid Specificity of Thermus Thermophilus Prolyl-tRNA Synthetase: Comparison with Histidyl-tRNA Synthetase. J.Mol.Biol. (2001)
- Release Date
- 2001-06-18
- Peptides
- PROLYL-TRNA SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.85 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 2 x PSD: 5'-O-[N-(PROLYL)-SULFAMOYL]ADENOSINE(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Yaremchuk, A. et al., A Succession of Substrate Induced Conformational Changes Ensures the Amino Acid Specificity of Thermus Thermophilus Prolyl-tRNA Synthetase: Comparison with Histidyl-tRNA Synthetase. J.Mol.Biol. (2001)
- Release Date
- 2001-06-18
- Peptides
- PROLYL-TRNA SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B