SMTL ID : 1h7t.1

The structure of CMP:2-keto-3-deoxy-manno-octonic acid synthetase and of its complexes with substrates and substrate analogues, here complex with CMP-NeuAc

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.48 Å

Oligo State

homo-dimer

Ligands

1 x C5P: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)

C5P.1: 13 residues within 4Å: Chain B: P.8, A.9, R.10, K.19, H.73, E.74, S.75, G.76, R.79, Q.96, G.97, D.98 Ligands: SIA.2 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:R.10, B:R.10, B:H.73, B:R.79, B:G.97, B:D.98 Water bridges: B:R.10 Salt bridges: B:K.19

1 x SIA: N-acetyl-alpha-neuraminic acid(Non-covalent)

SIA.2: 9 residues within 4Å: Chain B: K.19, Q.96, D.98, E.99, G.174, G.223, V.224, D.225 Ligands: C5P.1 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:Q.96 Hydrogen bonds: B:D.98, B:E.99, B:G.223, B:D.225 Water bridges: B:E.99, B:E.99 Salt bridges: B:K.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jelakovic, S. et al., The Structure of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid Synthetase and of its Complexes with Substrates and Substrate Analogs. J.Mol.Biol. (2001)

Release Date

2001-09-13

Peptides

3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE

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