SMTL ID : 1h8s.1 (1 other biounit)

Three-dimensional structure of anti-ampicillin single chain Fv fragment complexed with the hapten.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x AIC: (2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID(Non-covalent)

AIC.1: 13 residues within 4Å: Chain A: Y.39, Q.92, Y.97, L.99, F.101, W.164, N.166, V.168, N.181, A.228, R.229, W.230, W.233 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Y.97, A:L.99, A:F.101, A:N.166, A:V.168, A:A.228, A:W.233 Hydrogen bonds: A:Y.39, A:Y.39, A:Q.92, A:Y.97, A:Y.97, A:N.166 Water bridges: A:W.230

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: H.11, K.12, F.13 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.12, A:F.13, A:F.13 Salt bridges: A:H.11 SO4.3: 2 residues within 4Å: Chain A: K.12, A.103 4 PLIP interactions: 4 interactions with chain A Water bridges: A:K.12, A:K.12, A:G.175 Salt bridges: A:K.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burmester, J. et al., Selection, Characterization and X-Ray Structure of Anti-Ampicillin Single-Chain Fv Fragments from Phage-Displayed Murine Antibody Libraries. J.Mol.Biol. (2001)

Release Date

2001-08-02

Peptides

MUTANT AL2 6E7P9G: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

MUTANT AL2 6E7P9G

Related Entries With Identical Sequence