SMTL ID : 1hd2.1

Human peroxiredoxin 5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x BEZ: BENZOIC ACID(Non-covalent)

BEZ.1: 9 residues within 4Å: Chain A: P.40, T.44, P.45, G.46, C.47, L.116, F.120, R.127, T.147 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:P.40, A:L.116, A:F.120, A:T.147 Hydrogen bonds: A:G.46, A:C.47 Salt bridges: A:R.127 BEZ.7: 9 residues within 4Å: Chain B: P.40, T.44, P.45, G.46, C.47, L.116, F.120, R.127, T.147 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:P.40, B:L.116, B:F.120, B:T.147 Hydrogen bonds: B:T.44, B:G.46, B:C.47 Salt bridges: B:R.127

10 x BR: BROMIDE ION(Non-covalent)

BR.2: 1 residues within 4Å: Chain A: S.118 Ligand excluded by PLIP BR.3: 3 residues within 4Å: Chain A: T.50, G.54, P.155 Ligand excluded by PLIP BR.4: 2 residues within 4Å: Chain A: G.148, L.149 Ligand excluded by PLIP BR.5: 4 residues within 4Å: Chain A: R.86, K.89, A.90, E.91 Ligand excluded by PLIP BR.6: 3 residues within 4Å: Chain A: L.112, D.113, S.115 Ligand excluded by PLIP BR.8: 1 residues within 4Å: Chain B: S.118 Ligand excluded by PLIP BR.9: 3 residues within 4Å: Chain B: T.50, G.54, P.155 Ligand excluded by PLIP BR.10: 2 residues within 4Å: Chain B: G.148, L.149 Ligand excluded by PLIP BR.11: 4 residues within 4Å: Chain B: R.86, K.89, A.90, E.91 Ligand excluded by PLIP BR.12: 3 residues within 4Å: Chain B: L.112, D.113, S.115 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Declercq, J.P. et al., Crystal Structure of Human Peroxiredoxin 5, a Novel Type of Mammalian Peroxiredoxin at 1.5 A Resolution. J.Mol.Biol. (2001)

Release Date

2001-08-28

Peptides

PEROXIREDOXIN 5 RESIDUES 54-214: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PEROXIREDOXIN 5 RESIDUES 54-214

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