SMTL ID : 1hdi.1

Pig muscle 3-PHOSPHOGLYCERATE KINASE complexed with 3-PG and MgADP.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 16 residues within 4Å: Chain A: G.210, A.211, K.212, K.216, G.234, G.235, F.238, L.253, F.288, G.309, L.310, G.337, V.338, E.340, D.371 Ligands: MG.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:A.211, A:K.212, A:G.235, A:G.309, A:E.340, A:D.371 Water bridges: A:G.210 Salt bridges: A:K.216

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: D.371 Ligands: AMP.1 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:D.371, AMP.1

1 x 3PG: 3-PHOSPHOGLYCERIC ACID(Non-covalent)

3PG.3: 9 residues within 4Å: Chain A: D.20, N.22, R.35, H.59, R.62, R.119, G.163, T.164, R.167 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:D.20, A:N.22, A:R.35, A:G.163 Water bridges: A:H.166, A:R.167, A:G.393 Salt bridges: A:R.35, A:H.59, A:R.62, A:R.119, A:R.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Szilagyi, A.N. et al., A 1.8 A resolution structure of pig muscle 3-phosphoglycerate kinase with bound MgADP and 3-phosphoglycerate in open conformation: new insight into the role of the nucleotide in domain closure. J. Mol. Biol. (2001)

Release Date

2001-02-26

Peptides

PHOSPHOGLYCERATE KINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PHOSPHOGLYCERATE KINASE