SMTL ID : 1hds.1

MACROMOLECULAR STRUCTURE REFINEMENT BY RESTRAINED LEAST-SQUARES AND INTERACTIVE GRAPHICS AS APPLIED TO SICKLING DEER TYPE III HEMOGLOBIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)(Covalent)

HEM.1: 17 residues within 4Å: Chain A: T.39, Y.42, F.43, H.58, K.61, V.62, A.65, L.66, L.86, H.87, L.91, V.93, N.97, F.98, L.101, D.132, L.136 22 PLIP interactions: 22 interactions with chain A, Hydrophobic interactions: A:Y.42, A:Y.42, A:F.43, A:F.43, A:F.43, A:K.61, A:V.62, A:A.65, A:L.66, A:L.86, A:L.86, A:L.91, A:V.93, A:N.97, A:F.98, A:F.98, A:L.101, A:L.101, A:L.136 Salt bridges: A:K.61 pi-Stacking: A:H.58 Metal complexes: A:H.87 HEM.2: 16 residues within 4Å: Chain B: T.37, F.40, H.43, H.62, R.65, A.69, F.70, F.84, L.87, H.91, L.95, V.97, N.101, F.102, L.105, L.140 15 PLIP interactions: 15 interactions with chain B, Hydrophobic interactions: B:T.37, B:F.40, B:R.65, B:F.70, B:F.84, B:L.95, B:V.97, B:V.97, B:N.101, B:F.102, B:L.105, B:L.140 Salt bridges: B:H.43, B:R.65 Metal complexes: B:H.91 HEM.3: 17 residues within 4Å: Chain C: T.39, Y.42, F.43, H.45, H.58, K.61, V.62, L.83, L.86, H.87, L.91, V.93, N.97, F.98, L.101, D.132, L.136 14 PLIP interactions: 14 interactions with chain C, Hydrophobic interactions: C:Y.42, C:F.43, C:V.62, C:L.83, C:L.86, C:L.91, C:L.91, C:V.93, C:V.93, C:N.97, C:L.136 Salt bridges: C:H.45 pi-Stacking: C:H.58 Metal complexes: C:H.87 HEM.4: 15 residues within 4Å: Chain D: F.40, F.41, H.43, H.62, V.66, A.69, F.70, L.87, H.91, K.94, L.95, V.97, N.101, F.102, L.105 14 PLIP interactions: 14 interactions with chain D, Hydrophobic interactions: D:F.40, D:F.40, D:F.41, D:A.69, D:F.70, D:L.87, D:L.95, D:V.97, D:N.101, D:L.105, D:L.105 Salt bridges: D:H.43, D:K.94 Metal complexes: D:H.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Girling, R.L. et al., Macromolecular Structure Refinement by Restrained Least-Squares and Interactive Graphics as Applied to Sickling Deer Type III Hemoglobin. Acta Crystallogr.,Sect.A (1980)

Release Date

1979-12-07

Peptides

HEMOGLOBIN S (DEOXY) (ALPHA CHAIN): AC
HEMOGLOBIN S (DEOXY) (BETA CHAIN): BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

HEMOGLOBIN S (DEOXY) (ALPHA CHAIN)

HEMOGLOBIN S (DEOXY) (BETA CHAIN)