SMTL ID : 1hl3.1

CtBP/BARS in ternary complex with NAD(H) and PIDLSKK peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-dimer

Ligands

2 x PRO- ILE- ASP- LEU- SER- LYS- LYS: PRO-ILE-ASP-LEU-SER-LYS-LYS PEPTIDE(Non-covalent)

PRO-ILE-ASP-LEU-SER-LYS-LYS.1: 11 residues within 4Å: Chain A: M.39, T.47, V.48, A.49, F.50, C.51, E.58, I.59, H.60, E.61, V.63 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:T.47, A:A.49, A:A.49, A:V.63 Hydrogen bonds: A:V.48, A:V.48, A:F.50, A:F.50, A:E.61 PRO-ILE-ASP-LEU-SER-LYS-LYS.3: 11 residues within 4Å: Chain B: M.39, T.47, V.48, A.49, F.50, C.51, E.58, I.59, H.60, E.61, V.63 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:T.47, B:A.49, B:A.49, B:V.63 Hydrogen bonds: B:V.48, B:F.50, B:F.50, B:H.60, B:E.61

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.2: 25 residues within 4Å: Chain A: S.97, G.98, T.125, I.177, G.178, G.180, R.181, V.182, Y.200, D.201, P.202, Y.203, H.233, C.234, G.235, L.236, N.237, N.240, T.261, A.262, R.263, D.287, V.288, H.312, W.315 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:T.125, A:W.315 Hydrogen bonds: A:S.97, A:L.179, A:R.181, A:V.182, A:G.183, A:C.234, A:G.235, A:L.236, A:N.237, A:N.240, A:T.261, A:D.287, A:W.315 Salt bridges: A:R.181 pi-Stacking: A:Y.203 NAD.4: 25 residues within 4Å: Chain B: S.97, G.98, T.125, I.177, G.178, G.180, R.181, V.182, Y.200, D.201, P.202, Y.203, H.233, C.234, G.235, L.236, N.237, N.240, T.261, A.262, R.263, D.287, V.288, H.312, W.315 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:T.125, B:W.315 Hydrogen bonds: B:S.97, B:L.179, B:R.181, B:V.182, B:G.183, B:C.234, B:G.235, B:L.236, B:N.237, B:N.240, B:T.261, B:W.315 Salt bridges: B:R.181 pi-Stacking: B:Y.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nardini, M. et al., Ctbp/Bars: A Dual-Function Protein Involved in Transcription Co-Repression and Golgi Membrane Fission. Embo J. (2003)

Release Date

2003-06-19

Peptides

C-TERMINAL BINDING PROTEIN 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C-TERMINAL BINDING PROTEIN 3

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