SMTL ID : 1hm8.1 (1 other biounit)

CRYSTAL STRUCTURE OF S.PNEUMONIAE N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE, GLMU, BOUND TO ACETYL COENZYME A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-trimer

Ligands

6 x CA: CALCIUM ION(Non-functional Binders)(Non-covalent)

CA.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.2: 5 residues within 4Å: Chain A: N.414 Chain B: N.414 Chain C: N.414 Ligands: CA.5, CA.8 No protein-ligand interaction detected (PLIP) CA.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.5: 5 residues within 4Å: Chain A: N.414 Chain B: N.414 Chain C: N.414 Ligands: CA.2, CA.8 No protein-ligand interaction detected (PLIP) CA.7: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.8: 5 residues within 4Å: Chain A: N.414 Chain B: N.414 Chain C: N.414 Ligands: CA.2, CA.5 No protein-ligand interaction detected (PLIP)

3 x ACO: ACETYL COENZYME *A(Non-covalent)

ACO.3: 21 residues within 4Å: Chain A: Y.374, I.391, T.392, V.393, N.394, Y.395, I.418 Chain B: H.371, G.387, A.388, F.410, G.412, S.413, G.430, A.431, I.446, R.448, R.450 Chain C: K.454, Y.457, L.461 21 PLIP interactions: 5 interactions with chain A, 13 interactions with chain B, 3 interactions with chain C Hydrophobic interactions: A:Y.374, A:I.391, A:V.393, A:V.393, B:A.388, B:F.410, B:I.446, C:L.461 Hydrogen bonds: A:Y.395, B:A.388, B:S.413, B:S.413, B:A.431, B:R.448, B:R.448, B:R.448, B:R.450, B:R.450, C:Y.457 pi-Cation interactions: B:R.450 Salt bridges: C:K.454 ACO.6: 21 residues within 4Å: Chain A: K.454, Y.457, L.461 Chain B: Y.374, I.391, T.392, V.393, N.394, Y.395, I.418 Chain C: H.371, G.387, A.388, F.410, G.412, S.413, G.430, A.431, I.446, R.448, R.450 21 PLIP interactions: 13 interactions with chain C, 5 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: C:A.388, C:F.410, C:I.446, B:Y.374, B:I.391, B:V.393, B:V.393, A:L.461 Hydrogen bonds: C:A.388, C:S.413, C:S.413, C:A.431, C:R.448, C:R.448, C:R.448, C:R.450, C:R.450, B:Y.395, A:Y.457 pi-Cation interactions: C:R.450 Salt bridges: A:K.454 ACO.9: 21 residues within 4Å: Chain A: H.371, G.387, A.388, F.410, G.412, S.413, G.430, A.431, I.446, R.448, R.450 Chain B: K.454, Y.457, L.461 Chain C: Y.374, I.391, T.392, V.393, N.394, Y.395, I.418 21 PLIP interactions: 13 interactions with chain A, 5 interactions with chain C, 3 interactions with chain B Hydrophobic interactions: A:A.388, A:F.410, A:I.446, C:Y.374, C:I.391, C:V.393, C:V.393, B:L.461 Hydrogen bonds: A:A.388, A:S.413, A:S.413, A:A.431, A:R.448, A:R.448, A:R.448, A:R.450, A:R.450, C:Y.395, B:Y.457 pi-Cation interactions: A:R.450 Salt bridges: B:K.454

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sulzenbacher, G. et al., Crystal structure of Streptococcus pneumoniae N-acetylglucosamine-1-phosphate uridyltransferase bound to acetyl-coenzyme A reveals a novel active site architecture. J.Biol.Chem. (2001)

Release Date

2001-11-30

Peptides

UDP-N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

UDP-N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE

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