SMTL ID : 1hov.1

SOLUTION STRUCTURE OF A CATALYTIC DOMAIN OF MMP-2 COMPLEXED WITH SC-74020

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.70, D.72, H.85, H.98 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.70, A:D.72, A:H.85, A:H.98 ZN.2: 4 residues within 4Å: Chain A: H.120, H.124, H.130 Ligands: I52.5 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.120, A:H.124, A:H.130

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 8 residues within 4Å: Chain A: D.77, G.78, K.79, D.80, L.82, L.83, D.100, E.103 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.77, A:G.78, A:D.80, A:D.100, A:E.103 CA.4: 8 residues within 4Å: Chain A: D.60, I.61, M.62, G.92, V.93, G.94, G.95, D.96 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.60, A:G.92, A:G.94, A:D.96

1 x I52: N-{4-[(1-HYDROXYCARBAMOYL-2-METHYL-PROPYL)-(2-MORPHOLIN-4-YL-ETHYL)-SULFAMOYL]-4-PENTYL-BENZAMIDE(Non-covalent)

I52.5: 27 residues within 4Å: Chain A: V.42, G.81, L.82, L.83, A.84, H.85, A.86, F.115, L.116, V.117, A.119, H.120, E.121, H.124, H.130, A.136, L.137, A.139, P.140, I.141, Y.142, T.143, T.145, F.148, R.149, L.150 Ligands: ZN.2 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.83, A:H.85, A:L.116, A:L.137, A:Y.142, A:T.145, A:F.148 Hydrogen bonds: A:L.83, A:A.84, A:A.84, A:H.120, A:E.121, A:H.130, A:I.141 pi-Stacking: A:H.120

Links

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Citation

Feng, Y. et al., Solution structure and backbone dynamics of the catalytic domain of matrix metalloproteinase-2 complexed with a hydroxamic acid inhibitor. Biochim.Biophys.Acta (2002)

Release Date

2001-12-12

Peptides

MATRIX METALLOPROTEINASE-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

MATRIX METALLOPROTEINASE-2