SMTL ID : 1how.1

THE X-RAY CRYSTAL STRUCTURE OF SKY1P, AN SR PROTEIN KINASE IN YEAST

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: P.15, Y.16, K.17, D.18, F.95, N.96, H.97, K.98 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:P.15, A:K.17, A:D.18, A:D.18, A:N.96, A:K.98 Water bridges: A:A.19, A:K.98, A:K.98 Salt bridges: A:H.97, A:K.98 SO4.2: 3 residues within 4Å: Chain A: Y.263, R.266, R.323 3 PLIP interactions: 3 interactions with chain A Water bridges: A:Y.263 Salt bridges: A:R.266, A:R.323 SO4.3: 5 residues within 4Å: Chain A: G.30, H.31, F.32, S.33 Ligands: SO4.5 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.31, A:F.32 Water bridges: A:K.50 Salt bridges: A:K.50 SO4.4: 6 residues within 4Å: Chain A: H.8, P.9, A.10, K.26, T.34, W.36 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:A.10, A:W.36 Water bridges: A:T.34, A:T.34 Salt bridges: A:H.8, A:K.26 SO4.5: 8 residues within 4Å: Chain A: F.32, S.33, K.50, V.52, A.61, A.62, E.65 Ligands: SO4.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.33, A:E.65, A:G.183 Salt bridges: A:K.50 SO4.6: 2 residues within 4Å: Chain A: R.199, R.202 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.199, A:R.199 Salt bridges: A:R.199, A:R.202

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.7: 5 residues within 4Å: Chain A: H.125, E.227, G.231, D.232, F.233 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.227 EDO.8: 5 residues within 4Å: Chain A: E.110, V.111, L.112, G.113, L.164 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.112, A:G.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nolen, B. et al., The structure of Sky1p reveals a novel mechanism for constitutive activity. Nat.Struct.Biol. (2001)

Release Date

2001-02-28

Peptides

SERINE/THREONINE-PROTEIN KINASE YMR216C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SERINE/THREONINE-PROTEIN KINASE YMR216C

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