- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 4 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
FMN.2: 21 residues within 4Å:- Chain A: Y.26, L.27, P.79, T.80, G.81, S.108, Q.129, Y.131, T.156, K.231, S.253, H.255, G.256, R.258, D.284, S.285, G.286, R.288, G.307, R.308
- Ligands: SO4.1
24 PLIP interactions:24 interactions with chain A- Hydrophobic interactions: A:Y.26, A:T.80, A:R.308
- Hydrogen bonds: A:P.79, A:G.81, A:S.108, A:Q.129, A:Q.129, A:Y.131, A:T.156, A:K.231, A:K.231, A:S.253, A:S.285, A:G.286, A:G.307, A:R.308
- Water bridges: A:H.255, A:F.287, A:F.287, A:R.288, A:R.308
- Salt bridges: A:R.288, A:R.308
FMN.5: 21 residues within 4Å:- Chain B: Y.26, L.27, P.79, T.80, G.81, S.108, Q.129, Y.131, T.156, K.231, S.253, H.255, G.256, R.258, D.284, S.285, G.286, R.288, G.307, R.308
- Ligands: SO4.4
24 PLIP interactions:24 interactions with chain B- Hydrophobic interactions: B:Y.26, B:T.80, B:R.308
- Hydrogen bonds: B:P.79, B:G.81, B:S.108, B:Q.129, B:Q.129, B:Y.131, B:T.156, B:K.231, B:K.231, B:S.253, B:S.285, B:G.286, B:G.307, B:R.308
- Water bridges: B:H.255, B:F.287, B:F.287, B:R.288, B:R.308
- Salt bridges: B:R.288, B:R.308
FMN.8: 21 residues within 4Å:- Chain C: Y.26, L.27, P.79, T.80, G.81, S.108, Q.129, Y.131, T.156, K.231, S.253, H.255, G.256, R.258, D.284, S.285, G.286, R.288, G.307, R.308
- Ligands: SO4.7
24 PLIP interactions:24 interactions with chain C- Hydrophobic interactions: C:Y.26, C:T.80, C:R.308
- Hydrogen bonds: C:P.79, C:G.81, C:S.108, C:Q.129, C:Q.129, C:Y.131, C:T.156, C:K.231, C:K.231, C:S.253, C:S.285, C:G.286, C:G.307, C:R.308
- Water bridges: C:H.255, C:F.287, C:F.287, C:R.288, C:R.308
- Salt bridges: C:R.288, C:R.308
FMN.11: 21 residues within 4Å:- Chain D: Y.26, L.27, P.79, T.80, G.81, S.108, Q.129, Y.131, T.156, K.231, S.253, H.255, G.256, R.258, D.284, S.285, G.286, R.288, G.307, R.308
- Ligands: SO4.10
24 PLIP interactions:24 interactions with chain D- Hydrophobic interactions: D:Y.26, D:T.80, D:R.308
- Hydrogen bonds: D:P.79, D:G.81, D:S.108, D:Q.129, D:Q.129, D:Y.131, D:T.156, D:K.231, D:K.231, D:S.253, D:S.285, D:G.286, D:G.307, D:R.308
- Water bridges: D:H.255, D:F.287, D:F.287, D:R.288, D:R.308
- Salt bridges: D:R.288, D:R.308
- 4 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
MES.3: 4 residues within 4Å:- Chain A: D.240, I.243, K.276, T.277
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:D.240, A:K.276
MES.6: 4 residues within 4Å:- Chain B: D.240, I.243, K.276, T.277
2 PLIP interactions:2 interactions with chain B- Salt bridges: B:D.240, B:K.276
MES.9: 4 residues within 4Å:- Chain C: D.240, I.243, K.276, T.277
2 PLIP interactions:2 interactions with chain C- Salt bridges: C:D.240, C:K.276
MES.12: 4 residues within 4Å:- Chain D: D.240, I.243, K.276, T.277
2 PLIP interactions:2 interactions with chain D- Salt bridges: D:D.240, D:K.276
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sukumar, N. et al., Structure of an active soluble mutant of the membrane-associated (S)-mandelate dehydrogenase. Biochemistry (2001)
- Release Date
- 2001-09-19
- Peptides
- L(+)-MANDELATE DEHYDROGENASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 4 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 4 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sukumar, N. et al., Structure of an active soluble mutant of the membrane-associated (S)-mandelate dehydrogenase. Biochemistry (2001)
- Release Date
- 2001-09-19
- Peptides
- L(+)-MANDELATE DEHYDROGENASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A