SMTL ID : 1hw9.1

COMPLEX OF THE CATALYTIC PORTION OF HUMAN HMG-COA REDUCTASE WITH SIMVASTATIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.33 Å

Oligo State

homo-tetramer

Ligands

5 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 9 residues within 4Å: Chain A: A.143, N.146, R.147, R.150, E.298, K.301 Chain B: Y.58, E.107, N.108 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.146 Salt bridges: A:K.301 pi-Stacking: B:Y.58 ADP.3: 6 residues within 4Å: Chain A: Y.58, E.107, N.108 Chain B: A.143, N.146, R.147 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:N.146 Salt bridges: B:K.301 pi-Stacking: A:Y.58, A:Y.58 ADP.4: 15 residues within 4Å: Chain B: S.205, F.207, S.230, G.231, D.232, A.233, M.234, G.235, M.236, N.237, M.238, V.384, G.385, G.386, A.405 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:S.205, B:D.232, B:D.232, B:A.233, B:G.235, B:M.236, B:N.237, B:N.237, B:G.386 Water bridges: B:M.238, B:M.238 ADP.6: 8 residues within 4Å: Chain C: Y.58, E.107, N.108 Chain D: A.143, N.146, R.147, R.150, K.301 6 PLIP interactions: 4 interactions with chain C, 2 interactions with chain D Hydrogen bonds: C:Y.58, C:N.108, D:N.146 pi-Stacking: C:Y.58, C:Y.58 Salt bridges: D:K.301 ADP.9: 12 residues within 4Å: Chain D: R.206, F.207, S.230, G.231, D.232, A.233, G.235, M.236, N.237, M.238, V.384, A.405 13 PLIP interactions: 13 interactions with chain D Hydrogen bonds: D:R.206, D:D.232, D:D.232, D:D.232, D:A.233, D:G.235, D:N.237, D:N.237, D:M.238 Water bridges: D:M.234, D:G.385 pi-Stacking: D:F.207, D:F.207

4 x SIM: Simvastatin acid(Non-covalent)

SIM.2: 15 residues within 4Å: Chain A: E.138, C.140, L.141, S.144, K.314, A.330, H.331, N.334, L.432 Chain B: R.169, V.262, S.263, D.269, K.270, K.271 13 PLIP interactions: 9 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:V.262, A:L.141, A:L.432 Hydrogen bonds: B:R.169, B:R.169, B:S.263, B:K.270, A:N.334 Water bridges: B:N.265, B:K.271 Salt bridges: B:R.169, B:K.271, A:K.314 SIM.5: 15 residues within 4Å: Chain A: R.169, V.262, S.263, N.265, D.269, K.270, K.271 Chain B: E.138, C.140, L.141, S.144, K.314, A.330, N.334, L.432 14 PLIP interactions: 11 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:V.262, B:L.141 Hydrogen bonds: A:R.169, A:R.169, A:S.263, A:D.269, A:K.270, B:N.334 Water bridges: A:S.263, A:N.265, A:K.270 Salt bridges: A:R.169, A:K.271, B:K.314 SIM.7: 16 residues within 4Å: Chain C: R.169, V.262, S.263, N.265, D.269, K.270, K.271 Chain D: E.138, C.140, L.141, S.144, K.314, A.330, H.331, N.334, L.432 13 PLIP interactions: 9 interactions with chain C, 4 interactions with chain D Hydrogen bonds: C:R.169, C:R.169, C:S.263, C:D.269, C:K.270, D:N.334 Water bridges: C:S.263, C:N.265 Salt bridges: C:R.169, C:K.271, D:K.314 Hydrophobic interactions: D:L.141, D:L.432 SIM.8: 16 residues within 4Å: Chain C: E.138, C.140, L.141, S.144, K.314, A.330, N.334, L.432, L.436 Chain D: R.169, V.262, S.263, N.265, D.269, K.270, K.271 14 PLIP interactions: 9 interactions with chain D, 5 interactions with chain C Hydrophobic interactions: D:V.262, C:L.141, C:L.432, C:L.436 Hydrogen bonds: D:R.169, D:R.169, D:S.263, D:K.270, C:N.334 Water bridges: D:S.263, D:K.271 Salt bridges: D:R.169, D:K.271, C:K.314

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Istvan, E.S. et al., Structural mechanism for statin inhibition of HMG-CoA reductase. Science (2001)

Release Date

2001-05-11

Peptides

HMG-COA REDUCTASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

HMG-COA REDUCTASE

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