SMTL ID : 1hye.1

CRYSTAL STRUCTURE OF THE MJ0490 GENE PRODUCT, THE FAMILY OF LACTATE/MALATE DEHYDROGENASE, DIMERIC STRUCTURE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 24 residues within 4Å: Chain A: G.7, S.9, G.10, R.11, V.12, R.34, H.36, S.37, T.81, S.82, G.83, V.84, P.85, R.86, N.99, I.102, Y.106, I.121, T.122, N.123, L.146, H.178, E.219, P.232 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:P.232 Hydrogen bonds: A:G.7, A:S.9, A:S.9, A:S.9, A:G.10, A:R.11, A:V.12, A:R.34, A:S.37, A:G.83, A:G.83, A:R.86, A:N.99, A:Y.106, A:I.121, A:T.122, A:N.123, A:N.123 Water bridges: A:G.7, A:G.13, A:S.82 Salt bridges: A:R.34, A:H.36 pi-Cation interactions: A:R.34, A:R.34 NAP.2: 24 residues within 4Å: Chain B: G.7, S.9, G.10, R.11, V.12, R.34, H.36, S.37, T.81, S.82, G.83, V.84, P.85, R.86, N.99, I.102, Y.106, I.121, T.122, N.123, L.146, H.178, E.219, P.232 26 PLIP interactions: 26 interactions with chain B Hydrophobic interactions: B:P.232 Hydrogen bonds: B:G.7, B:S.9, B:S.9, B:S.9, B:G.10, B:R.11, B:V.12, B:R.34, B:S.37, B:G.83, B:G.83, B:R.86, B:N.99, B:Y.106, B:I.121, B:T.122, B:N.123, B:N.123 Water bridges: B:G.7, B:G.13, B:S.82 Salt bridges: B:R.34, B:H.36 pi-Cation interactions: B:R.34, B:R.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, B.I. et al., Crystal structure of the MJ0490 gene product of the hyperthermophilic archaebacterium Methanococcus jannaschii, a novel member of the lactate/malate family of dehydrogenases. J.Mol.Biol. (2001)

Release Date

2001-04-18

Peptides

L-LACTATE/MALATE DEHYDROGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

L-LACTATE/MALATE DEHYDROGENASE

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