SMTL ID : 1i1c.1

NON-FCRN BINDING FC FRAGMENT OF RAT IGG2A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

1 x NAG- NAG- BMA- MAN- NAG- MAN- NAG- FUL: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUL.1: 14 residues within 4Å: Chain A: F.19, F.21, K.24, V.40, V.42, D.43, Q.73, S.74, N.75, T.77, R.79 Ligands: NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2, NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2, NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.74, A:K.24, A:K.24

1 x NAG- NAG- BMA- MAN- NAG- MAN- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2: 14 residues within 4Å: Chain B: F.19, F.21, K.24, T.38, V.40, V.42, D.43, Q.73, S.74, N.75, T.77, R.79 Ligands: NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUL.1, NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUL.1 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.79, B:K.24, B:K.24, B:S.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martin, W.L. et al., Crystal structure at 2.8 A of an FcRn/heterodimeric Fc complex: mechanism of pH-dependent binding. Mol.Cell (2001)

Release Date

2001-02-14

Peptides

IG GAMMA-2A CHAIN C REGION: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

IG GAMMA-2A CHAIN C REGION

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