SMTL ID : 1i3g.1

CRYSTAL STRUCTURE OF AN AMPICILLIN SINGLE CHAIN FV, FORM 1, FREE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 9 residues within 4Å: Chain A: Y.39, Q.92, Y.94, F.101 Chain B: N.35, V.37, A.97, R.98, W.102 8 PLIP interactions: 4 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:Y.94, A:F.101, B:V.37, B:W.102 Hydrogen bonds: A:Y.39, A:Q.92, B:R.98 Water bridges: B:G.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burmester, J. et al., Selection, characterization and x-ray structure of anti-ampicillin single-chain Fv fragments from phage-displayed murine antibody libraries. J.Mol.Biol. (2001)

Release Date

2001-10-17

Peptides

ANTIBODY FV FRAGMENT: A
ANTIBODY FV FRAGMENT: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

ANTIBODY FV FRAGMENT

ANTIBODY FV FRAGMENT