SMTL ID : 1i5y.1

HIV-1 GP41 CORE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-trimer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: Q.5, N.8, R.12 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.5 Salt bridges: A:R.12 SO4.2: 3 residues within 4Å: Chain B: Q.5, N.8, R.12 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.5 Salt bridges: B:R.12 SO4.3: 3 residues within 4Å: Chain C: Q.5, N.8, R.12 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:Q.5 Salt bridges: C:R.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, M. et al., Structural and functional analysis of interhelical interactions in the human immunodeficiency virus type 1 gp41 envelope glycoprotein by alanine-scanning mutagenesis. J.Virol. (2001)

Release Date

2002-09-10

Peptides

TRANSMEMBRANE GLYCOPROTEIN (GP41): ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

TRANSMEMBRANE GLYCOPROTEIN (GP41)