SMTL ID : 1i6i.1

CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-AMPPCP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: S.104, D.248 Ligands: ACP.2 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.104, H2O.1, H2O.4, H2O.6

1 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)

ACP.2: 17 residues within 4Å: Chain A: R.11, R.13, P.14, S.58, Y.67, Q.98, T.99, G.100, A.101, G.102, K.103, S.104, Y.105, K.110, S.215, G.251 Ligands: MG.1 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:Y.67, A:Y.67, A:G.100, A:A.101, A:G.102, A:K.103, A:K.103, A:K.103, A:S.104, A:Y.105 Water bridges: A:R.11, A:R.11, A:S.104, A:K.110, A:N.209, A:S.215 pi-Stacking: A:Y.105, A:Y.105

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3: 3 residues within 4Å: Chain A: Q.29, M.30, W.57 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:M.30, A:M.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kikkawa, M. et al., Switch-based mechanism of kinesin motors. Nature (2001)

Release Date

2001-05-30

Peptides

KINESIN-LIKE PROTEIN KIF1A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

KINESIN-LIKE PROTEIN KIF1A