SMTL ID : 1i78.1 (3 other biounits)

CRYSTAL STRUCTURE OF OUTER MEMBRANE PROTEASE OMPT FROM ESCHERICHIA COLI

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 2 residues within 4Å: Chain A: Y.108 Ligands: BOG.2 No protein-ligand interaction detected (PLIP) BOG.2: 4 residues within 4Å: Chain A: L.74, G.75, S.76 Ligands: BOG.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.74 Hydrogen bonds: A:S.76, A:S.76, A:S.76

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 3 residues within 4Å: Chain A: T.2, Q.63, W.119 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:T.2, A:Q.63, A:Q.63 MPD.4: 1 residues within 4Å: Chain A: L.5 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vandeputte-Rutten, L. et al., Crystal structure of the outer membrane protease OmpT from Escherichia coli suggests a novel catalytic site. EMBO J. (2001)

Release Date

2001-10-03

Peptides

PROTEASE VII: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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PROTEASE VII

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