SMTL ID : 1i7g.1

CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN FROM HUMAN PPAR-ALPHA IN COMPLEX WITH THE AGONIST AZ 242

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 1 residues within 4Å: Chain A: E.217 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.217

1 x AZ2: (2S)-2-ETHOXY-3-[4-(2-{4-[(METHYLSULFONYL)OXY]PHENYL}ETHOXY)PHENYL]PROPANOIC ACID(Non-covalent)

AZ2.2: 18 residues within 4Å: Chain A: I.60, L.66, I.91, F.92, C.94, C.95, T.98, S.99, Y.133, M.149, V.151, I.158, I.173, M.174, H.259, V.263, L.279, Y.283 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.92, A:V.151, A:I.173 Hydrogen bonds: A:S.99, A:S.99, A:Y.133 Salt bridges: A:H.259

1 x CPQ: N,N-BIS(3-D-GLUCONAMIDOPROPYL)DEOXYCHOLAMIDE(Non-covalent)

CPQ.3: 7 residues within 4Å: Chain A: K.23, A.26, K.27, Y.30, S.192, L.229, H.230 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:K.23, A:A.26, A:K.27, A:Y.30, A:L.229 Hydrogen bonds: A:H.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cronet, P. et al., Structure of the PPARalpha and -gamma ligand binding domain in complex with AZ 242; ligand selectivity and agonist activation in the PPAR family. Structure (2001)

Release Date

2002-03-09

Peptides

PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR ALPHA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR ALPHA