SMTL ID : 1i7l.2 (1 other biounit)

CRYSTAL STRUCTURE ANALYSIS OF THE COMPLEX OF THE C DOMAIN OF SYNAPSIN II FROM RAT WITH ATP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-tetramer

Ligands

4 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 18 residues within 4Å: Chain A: I.136, V.156, K.158, S.164, G.165, K.168, E.194, P.195, F.196, I.197, D.202, R.217, W.224, T.226, N.227, K.262, V.264, F.274 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:K.158, A:G.165, A:E.194, A:E.194, A:I.197, A:D.202, A:R.217, A:T.226, A:T.226, A:N.227, A:N.227, A:E.275 Water bridges: A:S.164, A:S.164 Salt bridges: A:K.168, A:R.217, A:R.217, A:K.262, A:K.262 ATP.2: 23 residues within 4Å: Chain B: K.114, I.136, V.156, K.158, A.162, H.163, S.164, G.165, K.168, E.194, P.195, F.196, I.197, D.202, R.217, W.224, K.225, T.226, N.227, K.262, V.264, F.274, E.275 21 PLIP interactions: 21 interactions with chain B Hydrogen bonds: B:K.158, B:H.163, B:S.164, B:G.165, B:E.194, B:I.197, B:D.202, B:R.217, B:T.226, B:T.226, B:N.227 Water bridges: B:S.164, B:K.262, B:K.262 Salt bridges: B:K.114, B:K.158, B:K.168, B:K.168, B:K.262, B:K.262, B:K.262 ATP.3: 18 residues within 4Å: Chain C: I.136, V.156, K.158, S.164, G.165, K.168, E.194, P.195, F.196, I.197, D.202, R.217, W.224, T.226, N.227, K.262, V.264, F.274 18 PLIP interactions: 18 interactions with chain C Hydrogen bonds: C:K.158, C:G.165, C:E.194, C:I.197, C:D.202, C:R.217, C:T.226, C:T.226, C:N.227, C:N.227, C:E.275 Water bridges: C:S.164, C:S.164 Salt bridges: C:K.168, C:R.217, C:R.217, C:K.262, C:K.262 ATP.4: 23 residues within 4Å: Chain D: K.114, I.136, V.156, K.158, A.162, H.163, S.164, G.165, K.168, E.194, P.195, F.196, I.197, D.202, R.217, W.224, K.225, T.226, N.227, K.262, V.264, F.274, E.275 23 PLIP interactions: 23 interactions with chain D Hydrogen bonds: D:K.158, D:H.163, D:S.164, D:G.165, D:E.194, D:E.194, D:I.197, D:D.202, D:R.217, D:T.226, D:N.227, D:E.275 Water bridges: D:S.164, D:T.226, D:K.262, D:K.262 Salt bridges: D:K.114, D:K.158, D:K.168, D:K.168, D:K.262, D:K.262, D:K.262

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Esser, L. et al., ATP Binding Independent of Metal Cations in Synapsin II. To be Published

Release Date

2003-07-01

Peptides

SYNAPSIN II: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

SYNAPSIN II

Related Entries With Identical Sequence