SMTL ID : 1iak.1

HISTOCOMPATIBILITY ANTIGEN I-AK

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-1-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: R.80, S.81, N.82 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.82 NAG.2: 5 residues within 4Å: Chain A: V.120, N.122, E.170, H.171, W.172 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.170 Water bridges: A:I.121 NAG.3: 2 residues within 4Å: Chain B: N.15, Q.18 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.15, B:Q.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fremont, D.H. et al., Crystal structure of I-Ak in complex with a dominant epitope of lysozyme. Immunity (1998)

Release Date

1998-04-15

Peptides

MHC CLASS II I-AK: A
MHC CLASS II I-AK: B
MHC CLASS II I-AK: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
P

MHC CLASS II I-AK

MHC CLASS II I-AK

MHC CLASS II I-AK

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