SMTL ID : 1ida.1

CRYSTAL STRUCTURES OF HIV-2 PROTEASE IN COMPLEX WITH INHIBITORS CONTAINING THE HYDROXYETHYLAMINE DIPEPTIDE ISOSTERE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

1 x 0PO: N-[(1R)-1-{[(1S,2S)-1-benzyl-3-{(2R,4S)-2-(tert-butylcarbamoyl)-4-[(pyridin-3-ylmethyl)sulfanyl]piperidin-1-yl}-2-hydroxypropyl]carbamoyl}-2-methylpropyl]quinoline-2-carboxamide(Non-covalent)

0PO.1: 23 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, D.30, V.47, G.48, G.49, I.50, P.81, I.82, I.84 Chain B: D.25, G.27, A.28, D.29, V.47, G.48, G.49, I.50, P.81, I.82, I.84 22 PLIP interactions: 12 interactions with chain A, 10 interactions with chain B Hydrophobic interactions: A:L.23, A:D.30, A:V.47, A:I.50, A:P.81, A:I.82, A:I.82, A:I.84, B:V.47, B:P.81, B:P.81, B:I.82 Water bridges: A:G.27, A:D.29, A:I.50, B:G.48 Salt bridges: A:D.25, B:D.25 Hydrogen bonds: B:G.27, B:G.27, B:D.29, B:G.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tong, L. et al., Crystal structures of HIV-2 protease in complex with inhibitors containing the hydroxyethylamine dipeptide isostere. Structure (1995)

Release Date

1995-01-26

Peptides

Protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protease

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