SMTL ID : 1igr.1

Type 1 Insulin-like growth factor receptor (DOMAINS 1-3)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.1: 11 residues within 4Å: Chain A: N.105, T.107, S.128, L.129, I.130, L.131, D.132, L.206, R.222, H.223 Ligands: SO4.7 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:R.222 Hydrogen bonds: A:R.222

1 x NAG- NAG- BMA- MAN- FUC: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-FUC.2: 5 residues within 4Å: Chain A: N.284, G.285, S.288, Y.290, I.292 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:I.292

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 3 residues within 4Å: Chain A: R.18, E.20, N.21 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.20, A:E.20, A:N.21 NAG.4: 2 residues within 4Å: Chain A: N.214, T.216 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.214

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 3 residues within 4Å: Chain A: T.177, N.179, R.180 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.177, A:N.179, A:N.179 Salt bridges: A:R.180 SO4.6: 2 residues within 4Å: Chain A: R.245, F.251 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.245 SO4.7: 6 residues within 4Å: Chain A: R.104, N.105, L.206, G.207, R.222 Ligands: NAG-NAG-FUC.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.105, A:G.207, A:R.222 SO4.8: 4 residues within 4Å: Chain A: W.79, K.80, L.81, R.108 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.81 Salt bridges: A:R.108 SO4.9: 3 residues within 4Å: Chain A: R.44, P.46, N.72 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.72 Salt bridges: A:R.44 SO4.10: 3 residues within 4Å: Chain A: N.237, Y.239, R.249 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.239 Salt bridges: A:R.249 SO4.11: 4 residues within 4Å: Chain A: W.79, Y.224, R.240, G.243 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:W.79, A:Y.224, A:Y.224 Salt bridges: A:R.240 SO4.12: 2 residues within 4Å: Chain A: K.359, R.361 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.359, A:R.361

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garrett, T.P. et al., Crystal structure of the first three domains of the type-1 insulin-like growth factor receptor. Nature (1998)

Release Date

1999-09-27

Peptides

INSULIN-LIKE GROWTH FACTOR RECEPTOR 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

INSULIN-LIKE GROWTH FACTOR RECEPTOR 1