SMTL ID : 1iik.1

CRYSTAL STRUCTURE OF THE TRANSTHYRETIN MUTANT TTR Y114C-DATA COLLECTED AT CRYO TEMPERATURE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

12 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.1: 5 residues within 4Å: Chain A: F.87, C.114 Chain B: A.120, V.122 Chain D: R.21 1 PLIP interactions: 1 interactions with chain D Water bridges: D:R.21 BME.2: 7 residues within 4Å: Chain A: A.108, S.117, T.118, T.119 Ligands: BME.3, BME.8, BME.9 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.110, A:T.118 BME.3: 7 residues within 4Å: Chain C: A.108, S.117, T.118, T.119 Ligands: BME.2, BME.8, BME.9 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:L.110, C:S.117 BME.4: 6 residues within 4Å: Chain B: S.85, P.86, F.87, P.113, C.114 Chain C: R.21 No protein-ligand interaction detected (PLIP) BME.5: 8 residues within 4Å: Chain B: A.108, L.110, S.117, T.118, T.119 Ligands: BME.6, BME.11, BME.12 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.117, B:T.119 BME.6: 8 residues within 4Å: Chain D: A.108, L.110, S.117, T.118, T.119 Ligands: BME.5, BME.11, BME.12 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:S.117, D:T.119 BME.7: 5 residues within 4Å: Chain B: R.21 Chain C: F.87, C.114 Chain D: A.120, V.122 1 PLIP interactions: 1 interactions with chain B Water bridges: B:R.21 BME.8: 7 residues within 4Å: Chain C: A.108, S.117, T.118, T.119 Ligands: BME.2, BME.3, BME.9 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:L.110, C:T.118 BME.9: 7 residues within 4Å: Chain A: A.108, S.117, T.118, T.119 Ligands: BME.2, BME.3, BME.8 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.110, A:S.117 BME.10: 6 residues within 4Å: Chain A: R.21 Chain D: S.85, P.86, F.87, P.113, C.114 No protein-ligand interaction detected (PLIP) BME.11: 8 residues within 4Å: Chain D: A.108, L.110, S.117, T.118, T.119 Ligands: BME.5, BME.6, BME.12 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:S.117, D:T.119 BME.12: 8 residues within 4Å: Chain B: A.108, L.110, S.117, T.118, T.119 Ligands: BME.5, BME.6, BME.11 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.117, B:T.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eneqvist, T. et al., Disulfide-Bond Formation in the Transthyretin Mutant Y114C Prevents Amyloid Fibril Formation in Vivo and in Vitro. Biochemistry (2002)

Release Date

2002-11-15

Peptides

TRANSTHYRETIN: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

TRANSTHYRETIN

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